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IMMUNE CELL NK-CELLS Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cells
Nk-cells
Immune cell methods
NK-CELLS - Expression summary
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA:64.4 nTPM
Monaco:230.7 nTPM
Schmiedel:171.1 TPM

NK-CELLS - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

64.4
HPA sample nTPM
NK-cell
nTPM: 64.4
Samples: 6

Max nTPM: 77.7
Min nTPM: 28.3
P10809_1013 66.2
P10809_1033 77.0
P10809_1052 73.9
P10809_1071 63.5
P10809_1093 28.3
P10809_1103 77.7

NK-CELLS - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

230.7
Monaco sample nTPM
NK-cell
nTPM: 230.7
Samples: 4

Max nTPM: 299.7
Min nTPM: 185.6
RHH5316_R3683 202.8
RHH5224_R3596 299.7
RHH5253_R3625 185.6
RHH5282_R3654 234.5

NK-CELLS - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max subtype TPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

171.1
Schmiedel sample id TPM
NK-cell
TPM: 171.1
Samples: 90

Max TPM: 288.8
Min TPM: 119.6
NK_1 288.8
NK_2 255.9
NK_3 252.9
NK_4 242.3
NK_5 241.8
NK_6 237.4
NK_7 230.3
NK_8 224.7
NK_9 224.3
NK_10 224.0
NK_11 219.7
NK_12 216.8
NK_13 216.3
NK_14 206.5
NK_15 206.3
NK_16 200.7
NK_17 199.4
NK_18 194.6
NK_19 194.3
NK_20 194.1
NK_21 193.8
NK_22 192.3
NK_23 191.0
NK_24 189.0
NK_25 188.1
NK_26 187.8
NK_27 186.1
NK_28 183.6
NK_29 178.5
NK_30 177.7
NK_31 177.0
NK_32 175.8
NK_33 174.2
NK_34 174.0
NK_35 172.6
NK_36 171.3
NK_37 171.1
NK_38 170.6
NK_39 169.5
NK_40 168.3
NK_41 167.6
NK_42 166.1
NK_43 166.0
NK_44 164.8
NK_45 162.6
NK_46 161.9
NK_47 160.4
NK_48 160.2
NK_49 160.2
NK_50 159.8
NK_51 157.8
NK_52 157.6
NK_53 157.2
NK_54 156.5
NK_55 154.5
NK_56 154.4
NK_57 154.4
NK_58 152.9
NK_59 152.5
NK_60 152.1
NK_61 151.0
NK_62 150.5
NK_63 149.1
NK_64 148.9
NK_65 147.9
NK_66 147.6
NK_67 146.6
NK_68 145.2
NK_69 144.9
NK_70 144.5
NK_71 144.3
NK_72 144.3
NK_73 143.3
NK_74 141.8
NK_75 141.0
NK_76 140.1
NK_77 140.0
NK_78 139.1
NK_79 138.3
NK_80 135.9
NK_81 134.7
NK_82 134.3
NK_83 133.4
NK_84 129.4
NK_85 129.4
NK_86 125.3
NK_87 121.4
NK_88 120.8
NK_89 120.0
NK_90 119.6
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