A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
322.6
nTPM
Monaco:
611.5
nTPM
Schmiedel:
96.9
TPM
NK-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
322.6
HPA sample
nTPM
NK-cell nTPM: 322.5
Samples: 6
Max nTPM: 409.1
Min nTPM: 146.7
P10809_1013
382.2
P10809_1033
305.8
P10809_1052
409.1
P10809_1071
377.7
P10809_1093
146.7
P10809_1103
313.7
NK-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
611.5
Monaco sample
nTPM
NK-cell nTPM: 611.5
Samples: 4
Max nTPM: 835.9
Min nTPM: 442.5
RHH5316_R3683
605.4
RHH5224_R3596
442.5
RHH5253_R3625
562.0
RHH5282_R3654
835.9
NK-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
96.9
Schmiedel sample id
TPM
NK-cell TPM: 96.9
Samples: 90
Max TPM: 191.1
Min TPM: 46.0
NK_1
191.1
NK_2
170.1
NK_3
163.5
NK_4
153.3
NK_5
140.6
NK_6
134.0
NK_7
132.6
NK_8
132.3
NK_9
132.0
NK_10
129.1
NK_11
128.5
NK_12
126.1
NK_13
125.4
NK_14
124.3
NK_15
123.4
NK_16
121.6
NK_17
120.3
NK_18
119.9
NK_19
119.0
NK_20
117.7
NK_21
115.0
NK_22
113.1
NK_23
112.2
NK_24
111.0
NK_25
110.3
NK_26
110.2
NK_27
109.7
NK_28
109.1
NK_29
108.1
NK_30
107.2
NK_31
105.8
NK_32
104.1
NK_33
103.4
NK_34
102.8
NK_35
102.1
NK_36
101.4
NK_37
100.6
NK_38
100.2
NK_39
99.6
NK_40
97.8
NK_41
96.7
NK_42
95.8
NK_43
93.8
NK_44
92.9
NK_45
92.5
NK_46
90.7
NK_47
90.3
NK_48
87.7
NK_49
87.7
NK_50
87.7
NK_51
87.6
NK_52
86.9
NK_53
86.8
NK_54
86.7
NK_55
85.4
NK_56
85.3
NK_57
84.9
NK_58
84.6
NK_59
84.5
NK_60
84.2
NK_61
84.2
NK_62
84.1
NK_63
78.6
NK_64
78.1
NK_65
77.8
NK_66
77.0
NK_67
76.9
NK_68
76.3
NK_69
76.3
NK_70
76.2
NK_71
75.4
NK_72
73.9
NK_73
73.7
NK_74
73.0
NK_75
71.8
NK_76
71.4
NK_77
71.3
NK_78
71.2
NK_79
71.2
NK_80
70.1
NK_81
69.9
NK_82
65.3
NK_83
65.0
NK_84
64.5
NK_85
64.2
NK_86
59.9
NK_87
59.0
NK_88
59.0
NK_89
57.5
NK_90
46.0
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.