A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
403.5
nTPM
Monaco:
1863.9
nTPM
Schmiedel:
395.2
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
403.5
HPA sample
nTPM
Classical monocyte nTPM: 403.5
Samples: 6
Max nTPM: 920.5
Min nTPM: 232.4
P10809_1003
920.5
P10809_1020
358.7
P10809_1039
348.1
P10809_1058
279.3
P10809_1080
282.1
P10809_1107
232.4
Intermediate monocyte nTPM: 258.1
Samples: 6
Max nTPM: 326.9
Min nTPM: 189.5
P10809_1004
312.3
P10809_1023
238.2
P10809_1042
326.9
P10809_1061
284.7
P10809_1081
196.7
P10809_1108
189.5
Non-classical monocyte nTPM: 357.8
Samples: 5
Max nTPM: 474.6
Min nTPM: 205.7
P10809_1005
474.6
P10809_1053
412.1
P10809_1072
427.8
P10809_1082
205.7
P10809_1109
268.7
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
1863.9
Monaco sample
nTPM
Classical monocyte nTPM: 1863.9
Samples: 4
Max nTPM: 2234.7
Min nTPM: 1564.3
RHH5313_R3680
1664.9
RHH5221_R3593
1991.5
RHH5250_R3622
2234.7
RHH5279_R3651
1564.3
Intermediate monocyte nTPM: 1074.9
Samples: 4
Max nTPM: 1401.1
Min nTPM: 886.7
RHH5314_R3681
1054.1
RHH5222_R3594
886.7
RHH5251_R3623
1401.1
RHH5280_R3652
957.7
Non-classical monocyte nTPM: 1271.2
Samples: 4
Max nTPM: 1409.7
Min nTPM: 1077.1
RHH5315_R3682
1077.1
RHH5223_R3595
1350.1
RHH5252_R3624
1409.7
RHH5281_R3653
1247.9
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
395.2
Schmiedel sample id
TPM
Classical monocyte TPM: 395.2
Samples: 91
Max TPM: 510.4
Min TPM: 284.4
MONOCYTES_1
510.4
MONOCYTES_2
495.9
MONOCYTES_3
490.9
MONOCYTES_4
489.6
MONOCYTES_5
482.8
MONOCYTES_6
480.7
MONOCYTES_7
478.2
MONOCYTES_8
477.9
MONOCYTES_9
477.2
MONOCYTES_10
475.4
MONOCYTES_11
470.9
MONOCYTES_12
466.8
MONOCYTES_13
453.8
MONOCYTES_14
453.4
MONOCYTES_15
449.8
MONOCYTES_16
449.6
MONOCYTES_17
449.3
MONOCYTES_18
448.9
MONOCYTES_19
448.8
MONOCYTES_20
446.3
MONOCYTES_21
444.3
MONOCYTES_22
442.7
MONOCYTES_23
442.3
MONOCYTES_24
434.6
MONOCYTES_25
434.2
MONOCYTES_26
425.6
MONOCYTES_27
418.5
MONOCYTES_28
417.4
MONOCYTES_29
416.9
MONOCYTES_30
412.8
MONOCYTES_31
412.7
MONOCYTES_32
411.6
MONOCYTES_33
411.1
MONOCYTES_34
409.9
MONOCYTES_35
408.8
MONOCYTES_36
405.5
MONOCYTES_37
405.3
MONOCYTES_38
404.2
MONOCYTES_39
404.1
MONOCYTES_40
403.0
MONOCYTES_41
397.4
MONOCYTES_42
396.6
MONOCYTES_43
395.6
MONOCYTES_44
395.5
MONOCYTES_45
390.6
MONOCYTES_46
390.6
MONOCYTES_47
386.4
MONOCYTES_48
385.5
MONOCYTES_49
385.1
MONOCYTES_50
381.3
MONOCYTES_51
381.1
MONOCYTES_52
380.9
MONOCYTES_53
380.1
MONOCYTES_54
378.6
MONOCYTES_55
378.3
MONOCYTES_56
377.9
MONOCYTES_57
375.0
MONOCYTES_58
373.7
MONOCYTES_59
373.4
MONOCYTES_60
373.3
MONOCYTES_61
373.2
MONOCYTES_62
367.3
MONOCYTES_63
366.4
MONOCYTES_64
363.4
MONOCYTES_65
363.1
MONOCYTES_66
359.5
MONOCYTES_67
358.7
MONOCYTES_68
358.2
MONOCYTES_69
357.0
MONOCYTES_70
356.5
MONOCYTES_71
353.5
MONOCYTES_72
349.2
MONOCYTES_73
349.0
MONOCYTES_74
347.3
MONOCYTES_75
347.3
MONOCYTES_76
346.7
MONOCYTES_77
344.9
MONOCYTES_78
344.5
MONOCYTES_79
344.4
MONOCYTES_80
341.7
MONOCYTES_81
341.3
MONOCYTES_82
334.9
MONOCYTES_83
334.1
MONOCYTES_84
331.6
MONOCYTES_85
308.5
MONOCYTES_86
308.4
MONOCYTES_87
307.6
MONOCYTES_88
299.0
MONOCYTES_89
290.8
MONOCYTES_90
289.8
MONOCYTES_91
284.4
Show allShow less
Non-classical monocyte TPM: 352.4
Samples: 90
Max TPM: 489.7
Min TPM: 237.3
M2_1
489.7
M2_2
487.3
M2_3
470.9
M2_4
451.3
M2_5
440.1
M2_6
434.7
M2_7
422.1
M2_8
420.2
M2_9
419.6
M2_10
413.6
M2_11
413.5
M2_12
412.3
M2_13
412.3
M2_14
411.8
M2_15
410.6
M2_16
410.1
M2_17
407.8
M2_18
407.6
M2_19
406.5
M2_20
405.2
M2_21
398.0
M2_22
396.4
M2_23
393.7
M2_24
393.6
M2_25
392.0
M2_26
389.6
M2_27
386.4
M2_28
380.0
M2_29
375.2
M2_30
374.1
M2_31
373.4
M2_32
372.3
M2_33
368.8
M2_34
367.9
M2_35
365.5
M2_36
363.1
M2_37
362.9
M2_38
361.9
M2_39
361.5
M2_40
360.3
M2_41
360.2
M2_42
359.3
M2_43
358.6
M2_44
353.2
M2_45
352.2
M2_46
351.8
M2_47
351.2
M2_48
348.7
M2_49
348.5
M2_50
348.5
M2_51
346.6
M2_52
343.6
M2_53
342.2
M2_54
341.7
M2_55
334.3
M2_56
332.2
M2_57
328.7
M2_58
327.1
M2_59
326.6
M2_60
324.7
M2_61
321.3
M2_62
320.5
M2_63
320.0
M2_64
318.7
M2_65
316.2
M2_66
316.1
M2_67
309.3
M2_68
308.0
M2_69
305.1
M2_70
304.6
M2_71
303.4
M2_72
298.6
M2_73
298.2
M2_74
296.3
M2_75
296.1
M2_76
292.1
M2_77
291.6
M2_78
291.3
M2_79
291.2
M2_80
290.2
M2_81
284.7
M2_82
284.6
M2_83
278.7
M2_84
274.9
M2_85
267.0
M2_86
264.7
M2_87
261.6
M2_88
254.7
M2_89
252.5
M2_90
237.3
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.