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IMMUNE CELL NK-CELLS Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cells
Nk-cells
Immune cell methods
NK-CELLS - Expression summary
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA:23.6 nTPM
Monaco:82.2 nTPM
Schmiedel:77.6 TPM

NK-CELLS - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

23.6
HPA sample nTPM
NK-cell
nTPM: 23.6
Samples: 6

Max nTPM: 36.0
Min nTPM: 13.9
P10809_1013 36.0
P10809_1033 27.9
P10809_1052 21.4
P10809_1071 15.6
P10809_1093 13.9
P10809_1103 26.9

NK-CELLS - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

82.2
Monaco sample nTPM
NK-cell
nTPM: 82.3
Samples: 4

Max nTPM: 92.0
Min nTPM: 66.3
RHH5316_R3683 66.3
RHH5224_R3596 81.2
RHH5253_R3625 89.5
RHH5282_R3654 92.0

NK-CELLS - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max subtype TPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

77.6
Schmiedel sample id TPM
NK-cell
TPM: 77.6
Samples: 90

Max TPM: 153.1
Min TPM: 48.6
NK_1 153.1
NK_2 142.1
NK_3 110.2
NK_4 108.0
NK_5 106.7
NK_6 105.4
NK_7 104.8
NK_8 101.3
NK_9 100.6
NK_10 98.9
NK_11 98.6
NK_12 98.3
NK_13 96.7
NK_14 96.1
NK_15 95.8
NK_16 91.2
NK_17 90.3
NK_18 89.9
NK_19 89.6
NK_20 88.7
NK_21 87.9
NK_22 87.2
NK_23 86.6
NK_24 84.3
NK_25 84.1
NK_26 83.6
NK_27 83.4
NK_28 82.8
NK_29 82.7
NK_30 81.9
NK_31 81.5
NK_32 81.1
NK_33 81.1
NK_34 80.9
NK_35 79.8
NK_36 79.2
NK_37 78.5
NK_38 78.4
NK_39 77.5
NK_40 77.5
NK_41 77.4
NK_42 77.0
NK_43 75.9
NK_44 75.8
NK_45 75.2
NK_46 73.9
NK_47 73.2
NK_48 72.9
NK_49 72.4
NK_50 72.3
NK_51 71.9
NK_52 71.9
NK_53 71.0
NK_54 70.8
NK_55 70.4
NK_56 69.2
NK_57 68.7
NK_58 68.2
NK_59 68.2
NK_60 67.9
NK_61 67.8
NK_62 67.1
NK_63 66.5
NK_64 66.4
NK_65 66.0
NK_66 66.0
NK_67 65.3
NK_68 65.0
NK_69 64.8
NK_70 64.5
NK_71 64.3
NK_72 64.3
NK_73 62.9
NK_74 62.3
NK_75 61.8
NK_76 61.4
NK_77 60.4
NK_78 60.3
NK_79 60.3
NK_80 60.3
NK_81 59.4
NK_82 59.0
NK_83 58.2
NK_84 57.1
NK_85 56.6
NK_86 55.4
NK_87 55.1
NK_88 54.2
NK_89 52.0
NK_90 48.6
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