HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Neuronal cells: Low
RNA expressioni
Consensus:389.3 nTPM
HPA Brain:632.8 nTPM
GTEx:389.3 nTPM
FANTOM5:1267.7 Scaled Tags Per Million
Pig:729.2 nTPM
Mouse:696.1 nTPM
Allen mouse:19.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002913
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 632.8
Sample id Sample description nTPM
Hippocampus
nTPM: 615.6
1898 Male, age 80, left hemisphere 687.3
1911 Female, age 85, right hemisphere 653.3
1855 Male, age 76, left hemisphere 632.3
2529 Female, age 94, left hemisphere 628.2
2148 Female, age 91, left hemisphere 568.7
2621 Female, age 67, right hemisphere 523.9
Dentate gyrus
nTPM: 571.7
2010 Male, age 76, both hemispheres 712.2
2528 Male, age 74, both hemispheres 698.8
2530 Female, age 94, left hemisphere 569.2
2246 Female, age 85, both hemispheres 544.4
1927 Female, age 91, both hemispheres 493.0
2531 Female, age 67, both hemispheres 412.6
Entorhinal gyrus
nTPM: 474.2
2117 Female, age 91, right hemisphere 744.4
1938 Female, age 85, left hemisphere 546.6
2764 Male, age 80, right hemisphere 477.7
1787 Male, age 76, left hemisphere 424.8
2686 Male, age 75, right hemisphere 338.6
2613 Female, age 94, left hemisphere 312.8
Hippocampus, CA1
nTPM: 632.8
2749 Male, age 80, left hemisphere 747.6
1873 Female, age 85, both hemispheres 699.7
2527 Male, age 74, both hemispheres 627.8
2045 Male, age 76, both hemispheres 593.8
2082 Female, age 91, right hemisphere 495.3
Hippocampus, CA2
nTPM: 584.5
1963 Male, age 80, left hemisphere 746.5
2249 Male, age 74, both hemispheres 718.5
1892 Male, age 76, both hemispheres 566.7
2113 Female, age 91, right hemisphere 557.8
1940 Female, age 85, left hemisphere 496.7
2437 Female, age 94, left hemisphere 420.7
Hippocampus, CA3
nTPM: 538.3
1891 Female, age 85, both hemispheres 675.7
2137 Male, age 80, left hemisphere 592.3
1867 Male, age 76, both hemispheres 575.2
2436 Male, age 74, both hemispheres 507.4
2620 Female, age 94, left hemisphere 473.9
2861 Female, age 67, both hemispheres 405.4
Parahippocampal cortex
nTPM: 473.3
1933 Female, age 85, both hemispheres 591.3
2250 Female, age 67, right hemisphere 555.4
2018 Male, age 76, both hemispheres 547.7
2692 Male, age 74, both hemispheres 466.3
1990 Female, age 91, right hemisphere 463.8
2245 Female, age 91, both hemispheres 450.6
2532 Female, age 72, left hemisphere 447.9
1850 Male, age 80, both hemispheres 446.5
2693 Female, age 94, both hemispheres 395.2
2622 Female, age 67, right hemisphere 368.5
Perirhinal gyrus
nTPM: 430.6
1794 Male, age 80, right hemisphere 447.0
1847 Female, age 91, left hemisphere 446.9
1841 Female, age 85, right hemisphere 441.7
2521 Female, age 94, right hemisphere 431.8
2848 Male, age 76, right hemisphere 385.7
Subiculum
nTPM: 586.5
2042 Male, age 76, both hemispheres 727.5
2729 Female, age 91, right hemisphere 672.2
1901 Male, age 80, both hemispheres 628.5
1977 Female, age 85, both hemispheres 583.8
2619 Male, age 74, both hemispheres 504.9
2438 Female, age 94, left hemisphere 401.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 389.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 389.3
Samples: 255

Max nTPM: 708.3
Min nTPM: 114.7
Std nTPM: 95.3
Median nTPM: 381.5
GTEX-11TTK-0011-R1b-SM-GIN92 60-69 years, female 708.3
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 652.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 635.4
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 626.1
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 609.4
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 601.1
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 596.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 596.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 590.1
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 588.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 581.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1267.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1267.7
FF:10153-102I9 76 years, female 1292.3
FF:10169-103B7 60 years, female 1243.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 729.2
Pig sample Sample description nTPM
Subiculum
nTPM: 693.0
Samples: 4

Max nTPM: 788.5
Min nTPM: 633.9
Sample A Female 788.5
Sample B Female 706.1
Sample C Male 643.4
Sample D Male 633.9
Dorsal hippocampus
nTPM: 729.2
Samples: 4

Max nTPM: 886.1
Min nTPM: 553.5
Sample A Female 886.1
Sample B Female 656.1
Sample C Male 821.1
Sample D Male 553.5
Entorhinal cortex
nTPM: 636.9
Samples: 4

Max nTPM: 748.3
Min nTPM: 533.1
Sample A Female 615.6
Sample B Female 650.5
Sample C Male 748.3
Sample D Male 533.1
Ventral hippocampus
nTPM: 653.2
Samples: 4

Max nTPM: 706.2
Min nTPM: 573.3
Sample A Female 637.1
Sample B Female 573.3
Sample C Male 696.3
Sample D Male 706.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 696.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 635.0
Samples: 4

Max nTPM: 652.7
Min nTPM: 602.3
Sample A Male 649.6
Sample B Male 635.4
Sample C Female 652.7
Sample D Female 602.3
Hippocampal formation
nTPM: 696.1
Samples: 4

Max nTPM: 746.7
Min nTPM: 632.3
Sample A Male 746.7
Sample B Male 697.5
Sample C Female 708.0
Sample D Female 632.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 19.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.4
544520 Antisense, RP_040324_01_G06, Mouse strain C57BL/6J (56 days, male) 22.5
74357593 Antisense, RP_060117_01_A08, Mouse strain C57BL/6J (56 days, male) 16.4

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