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  • TISSUE

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  • GPM6B
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:210.9 nTPM
HPA Brain:662.7 nTPM
GTEx:210.9 nTPM
Pig:474.1 nTPM
Mouse:365.9 nTPM
Allen mouse:6.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

662.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 263.4
2226 Male, age 75, left hemisphere 265.4
1961 Female, age 42, unknown 261.4
Dorsomedial nucleus
nTPM: 370.9
2017 Female, age 42, unknown 422.6
1989 Male, age 62, unknown 384.8
2041 Female, age 72, unknown 305.4
Lateral hypothalamic area
nTPM: 398.7
2271 Male, age 75, both hemispheres 481.9
1791 Male, age 80, right hemisphere 434.3
2228 Male, age 66, unknown 389.6
2412 Male, age 62, unknown 288.9
Mammillary body
nTPM: 519.7
1945 Male, age 80, right hemisphere 597.3
1834 Female, age 42, unknown 570.3
2413 Male, age 66, unknown 479.7
1923 Female, age 72, unknown 476.4
1948 Female, age 72, unknown 474.6
Paraventricular nucleus
nTPM: 383.9
2700 Male, age 62, unknown 383.9
Preoptic area
nTPM: 362.5
2414 Female, age 72, unknown 450.5
1861 Female, age 42, unknown 400.1
1907 Male, age 80, right hemisphere 236.9
Supraoptic nucleus
nTPM: 662.7
1894 Female, age 72, unknown 836.9
2043 Male, age 62, unknown 819.8
2835 Female, age 72, unknown 331.4
Ventromedial nucleus
nTPM: 271.5
1982 Female, age 72, unknown 281.9
1822 Female, age 42, unknown 261.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

210.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 210.9
Samples: 257

Max nTPM: 649.0
Min nTPM: 74.7
Std nTPM: 97.9
Median nTPM: 184.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 649.0
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 642.4
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 550.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 513.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 476.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 445.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 441.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 438.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 435.0
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 426.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 418.2
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 412.7
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 406.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 404.5
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 397.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 395.1
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 387.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 386.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 382.7
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 380.9
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 376.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 366.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 365.6
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 360.0
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 353.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 343.4
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 341.5
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 339.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 336.1
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 324.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 320.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 313.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 313.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 312.3
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 312.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 312.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 311.8
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 311.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 309.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 307.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 307.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 304.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 303.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 303.0
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 298.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 298.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 296.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 290.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 288.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 286.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 285.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 283.2
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 283.1
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 278.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 276.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 272.7
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 269.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 268.2
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 265.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 264.0
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 262.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 256.9
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 255.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 254.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 252.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 250.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 250.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 250.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 248.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 248.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 246.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 242.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 241.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 241.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 238.2
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 238.0
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 237.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 237.4
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 235.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 234.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 233.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 233.0
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 231.3
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 230.9
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 229.3
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 228.9
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 225.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 224.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 224.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 223.8
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 222.7
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 219.8
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 219.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 218.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 217.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 215.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 215.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 215.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 214.2
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 212.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 210.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 210.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 210.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 206.0
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 205.9
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 205.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 205.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 205.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 203.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 202.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 200.2
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 198.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 197.8
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 197.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 197.6
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 196.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 195.9
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 193.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 192.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 192.1
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 190.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 190.6
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 188.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 188.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 188.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 187.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 186.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 184.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 184.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 183.8
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 182.2
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 180.5
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 178.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 178.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 178.1
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 175.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 175.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 175.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 174.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 173.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 173.6
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 173.4
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 173.2
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 173.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 172.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 171.5
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 171.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 170.9
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 169.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 167.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 166.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 165.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 165.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 165.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 162.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 162.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 161.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 160.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 160.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 160.2
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 159.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 158.9
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 158.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 157.4
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 157.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 157.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 156.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 156.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 155.6
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 153.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 152.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 152.7
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 152.7
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 152.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 151.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 151.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 150.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 148.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 148.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 147.6
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 146.9
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 146.8
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 146.6
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 145.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 145.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 145.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 144.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 144.5
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 143.4
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 143.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 142.7
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 142.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 142.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 141.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 141.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 141.1
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 139.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 138.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 138.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 138.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 136.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 135.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 135.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 134.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 133.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 133.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 133.0
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 132.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 131.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 131.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 130.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 127.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 127.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 126.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 123.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 122.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 122.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 122.1
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 122.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 121.6
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 121.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 120.8
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 120.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 120.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 117.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 116.5
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 116.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 116.5
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 116.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 116.0
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 115.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 114.7
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 114.6
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 114.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 113.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 113.1
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 112.9
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 110.9
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 110.2
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 109.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 107.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 107.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 106.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 105.9
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 105.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 103.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 102.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 101.2
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 99.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 99.0
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 97.8
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 92.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 90.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 80.4
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 77.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 75.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 74.7
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

474.1
Pig sample Sample description nTPM
Hypothalamus
nTPM: 474.1
Samples: 4

Max nTPM: 556.4
Min nTPM: 345.9
Sample A Female 556.4
Sample B Female 533.8
Sample C Male 460.3
Sample D Male 345.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

365.9
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 365.9
Samples: 4

Max nTPM: 387.8
Min nTPM: 333.8
Sample A Male 333.8
Sample B Male 375.4
Sample C Female 366.6
Sample D Female 387.8

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.6
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 6.6
544520 Antisense, RP_040324_01_G06, Mouse strain C57BL/6J (56 days, male) 7.2
74357593 Antisense, RP_060117_01_A08, Mouse strain C57BL/6J (56 days, male) 6.1

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