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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
355.2
nTPM
FANTOM5:
411.3
Scaled Tags Per Million
Pig:
241.9
nTPM
Allen mouse:
2.3
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
355.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 205.3
1984
Male, age 76, both hemispheres
270.3
2301
Female, age 85, both hemispheres
195.4
2090
Male, age 80, both hemispheres
185.1
2188
Female, age 91, both hemispheres
170.4
Dorsal cochlear nucleus nTPM: 259.7
2058
Male, age 76, both hemispheres
313.6
2370
Male, age 61, both hemispheres
281.0
2802
Male, age 74, right hemisphere
277.7
2187
Female, age 91, both hemispheres
221.7
2378
Male, age 80, both hemispheres
204.7
Dorsal tegmental nucleus nTPM: 254.5
2083
Male, age 80, both hemispheres
302.4
1936
Male, age 76, left hemisphere
278.6
2326
Male, age 74, both hemispheres
229.0
2358
Male, age 61, both hemispheres
207.9
Dorsolateral tegmental area nTPM: 260.8
2654
Male, age 80, both hemispheres
292.7
2751
Female, age 85, both hemispheres
291.8
2141
Male, age 76, both hemispheres
268.2
2360
Male, age 74, both hemispheres
266.7
2337
Male, age 61, both hemispheres
184.6
Kolliker-Fuse nucleus nTPM: 310.4
2315
Male, age 76, right hemisphere
439.0
2163
Male, age 80, both hemispheres
314.7
2793
Female, age 91, left hemisphere
177.4
Lateral lemniscal nuclei nTPM: 273.0
2746
Female, age 85, left hemisphere
325.7
2169
Male, age 76, both hemispheres
323.3
2453
Male, age 74, right hemisphere
311.6
2036
Male, age 80, both hemispheres
240.0
2320
Female, age 91, left hemisphere
164.2
Lateral parabrachial nucleus nTPM: 275.3
2139
Female, age 85, right hemisphere
390.5
2013
Male, age 80, both hemispheres
245.2
2792
Male, age 76, both hemispheres
242.5
2790
Male, age 61, both hemispheres
223.0
Lateral vestibular nucleus nTPM: 269.5
2184
Male, age 76, both hemispheres
308.2
2311
Male, age 80, both hemispheres
230.8
Locus coeruleus nTPM: 355.2
2014
Male, age 55, unknown
475.2
2317
Female, age 72, unknown
408.4
2123
Female, age 91, both hemispheres
356.0
2788
Male, age 74, unknown
341.6
1980
Male, age 76, both hemispheres
320.1
2720
Male, age 74, both hemispheres
307.5
2162
Male, age 80, both hemispheres
277.8
Medial parabrachial nucleus nTPM: 262.7
2170
Female, age 91, both hemispheres
276.5
2854
Male, age 80, both hemispheres
270.5
2156
Male, age 61, both hemispheres
266.5
2786
Male, age 76, both hemispheres
252.5
2463
Female, age 85, right hemisphere
247.4
Medial periolivary nuclei nTPM: 292.0
2791
Male, age 74, right hemisphere
369.8
2063
Male, age 76, both hemispheres
363.5
2171
Female, age 85, both hemispheres
361.6
2081
Male, age 80, both hemispheres
186.6
2458
Female, age 91, both hemispheres
178.7
Motor facial nucleus nTPM: 303.9
2062
Male, age 76, both hemispheres
399.4
2795
Female, age 91, both hemispheres
394.8
2365
Male, age 74, right hemisphere
322.2
2126
Male, age 61, both hemispheres
256.8
2327
Male, age 80, both hemispheres
226.7
2697
Female, age 85, both hemispheres
223.2
Motor trigeminal nucleus nTPM: 237.5
2309
Male, age 76, both hemispheres
267.6
2079
Male, age 80, both hemispheres
265.3
2335
Male, age 61, both hemispheres
262.5
2560
Male, age 74, both hemispheres
222.1
2321
Female, age 91, both hemispheres
169.8
Nuclei of the trapezoid body nTPM: 339.1
1983
Male, age 76, both hemispheres
396.8
2159
Male, age 61, both hemispheres
382.4
2735
Female, age 85, both hemispheres
380.9
2368
Female, age 91, both hemispheres
291.3
2166
Male, age 80, both hemispheres
244.2
Nucleus raphe magnus nTPM: 336.4
2160
Male, age 61, both hemispheres
446.6
2455
Male, age 74, both hemispheres
426.2
2051
Male, age 76, both hemispheres
344.7
2172
Female, age 85, both hemispheres
342.1
2328
Male, age 80, both hemispheres
252.6
2459
Female, age 91, both hemispheres
206.4
Paramedian reticular nucleus nTPM: 318.6
2057
Male, age 80, both hemispheres
335.1
2313
Male, age 61, both hemispheres
330.0
2050
Female, age 85, both hemispheres
320.9
2052
Male, age 76, both hemispheres
288.5
Pedunculopontine tegmental nucleus nTPM: 259.3
1921
Female, age 85, both hemispheres
303.1
2334
Male, age 80, both hemispheres
259.8
2338
Male, age 61, both hemispheres
215.1
Pontine nuclei nTPM: 310.8
1863
Male, age 55, unknown
449.1
2787
Female, age 85, both hemispheres
444.4
2727
Male, age 61, right hemisphere
366.6
2109
Female, age 72, unknown
356.0
1968
Male, age 76, left hemisphere
333.0
2115
Male, age 80, left hemisphere
200.0
2454
Male, age 74, left hemisphere
175.1
2319
Female, age 91, both hemispheres
162.5
Pontine raphe nucleus nTPM: 327.3
2122
Female, age 85, midline
333.1
2853
Male, age 76, midline
321.5
Posteroventral cochlear nucleus nTPM: 228.5
2070
Male, age 76, both hemispheres
321.2
2752
Female, age 85, both hemispheres
311.6
2371
Male, age 61, both hemispheres
260.7
2341
Male, age 80, both hemispheres
129.4
2135
Female, age 91, both hemispheres
119.4
Principal sensory trigeminal nucleus nTPM: 282.2
2158
Male, age 61, both hemispheres
392.6
2324
Male, age 76, both hemispheres
294.4
2008
Male, age 80, left hemisphere
281.2
2367
Female, age 91, left hemisphere
160.7
Reticular pontine nucleus, caudal nTPM: 247.2
2092
Male, age 76, both hemispheres
336.5
2332
Male, age 80, right hemisphere
276.5
2457
Female, age 91, both hemispheres
208.0
2559
Male, age 74, both hemispheres
167.8
Reticular pontine nucleus, oral nTPM: 263.9
2012
Female, age 85, both hemispheres
330.7
1939
Male, age 80, both hemispheres
320.2
2167
Male, age 76, both hemispheres
290.7
2361
Male, age 74, both hemispheres
217.7
2366
Female, age 91, both hemispheres
160.2
Reticulotegmental nucleus nTPM: 288.7
2325
Male, age 76, both hemispheres
319.8
2333
Male, age 80, both hemispheres
302.3
2322
Female, age 91, both hemispheres
282.6
2452
Male, age 74, both hemispheres
250.2
Spinal trigeminal nucleus, oral nTPM: 287.6
1978
Male, age 76, both hemispheres
312.2
2737
Female, age 85, both hemispheres
297.2
2164
Male, age 80, both hemispheres
253.3
Subcoeruleus area nTPM: 249.9
1958
Male, age 80, both hemispheres
303.7
2323
Female, age 91, left hemisphere
262.4
2089
Male, age 76, left hemisphere
250.9
2369
Female, age 85, left hemisphere
225.5
2451
Male, age 74, both hemispheres
207.1
Superior olive nTPM: 282.0
2364
Male, age 74, right hemisphere
351.5
1875
Female, age 85, both hemispheres
344.1
2020
Male, age 76, both hemispheres
283.0
2329
Male, age 80, right hemisphere
226.9
2561
Female, age 91, both hemispheres
204.4
Ventral periolivary nuclei nTPM: 266.9
2165
Male, age 80, both hemispheres
329.1
2130
Female, age 85, both hemispheres
316.6
2023
Male, age 76, both hemispheres
274.5
2794
Female, age 91, left hemisphere
147.4
Ventrolateral tegmental area, A5 NE cell group nTPM: 275.1
2449
Male, age 74, both hemispheres
319.1
2840
Female, age 85, both hemispheres
297.9
1959
Male, age 76, both hemispheres
295.2
2359
Male, age 61, both hemispheres
263.6
2161
Male, age 80, both hemispheres
254.4
2456
Female, age 91, both hemispheres
220.0
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
241.9
Pig sample
Sample description
nTPM
Pons nTPM: 241.9
Samples: 4
Max nTPM: 356.8
Min nTPM: 177.0
Sample A
Female
356.8
Sample B
Female
213.1
Sample C
Male
220.8
Sample D
Male
177.0
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.