A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
21.6
nTPM
Monaco:
125.5
nTPM
Schmiedel:
58.7
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
21.6
HPA sample
nTPM
Classical monocyte nTPM: 20.7
Samples: 6
Max nTPM: 24.6
Min nTPM: 16.9
P10809_1003
21.3
P10809_1020
24.6
P10809_1039
19.8
P10809_1058
21.0
P10809_1080
20.4
P10809_1107
16.9
Intermediate monocyte nTPM: 21.6
Samples: 6
Max nTPM: 28.0
Min nTPM: 15.5
P10809_1004
21.7
P10809_1023
22.1
P10809_1042
23.4
P10809_1061
28.0
P10809_1081
18.9
P10809_1108
15.5
Non-classical monocyte nTPM: 20.4
Samples: 5
Max nTPM: 35.1
Min nTPM: 13.4
P10809_1005
13.7
P10809_1053
25.9
P10809_1072
35.1
P10809_1082
13.4
P10809_1109
13.7
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
125.5
Monaco sample
nTPM
Classical monocyte nTPM: 112.8
Samples: 4
Max nTPM: 126.2
Min nTPM: 99.7
RHH5313_R3680
126.2
RHH5221_R3593
120.6
RHH5250_R3622
104.5
RHH5279_R3651
99.7
Intermediate monocyte nTPM: 106.3
Samples: 4
Max nTPM: 160.9
Min nTPM: 84.0
RHH5314_R3681
89.1
RHH5222_R3594
160.9
RHH5251_R3623
84.0
RHH5280_R3652
91.3
Non-classical monocyte nTPM: 125.4
Samples: 4
Max nTPM: 166.2
Min nTPM: 94.3
RHH5315_R3682
94.3
RHH5223_R3595
166.2
RHH5252_R3624
101.4
RHH5281_R3653
139.9
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
58.7
Schmiedel sample id
TPM
Classical monocyte TPM: 47.6
Samples: 91
Max TPM: 59.9
Min TPM: 38.2
MONOCYTES_1
59.9
MONOCYTES_2
59.1
MONOCYTES_3
58.0
MONOCYTES_4
57.3
MONOCYTES_5
56.6
MONOCYTES_6
56.2
MONOCYTES_7
55.8
MONOCYTES_8
55.8
MONOCYTES_9
55.7
MONOCYTES_10
55.3
MONOCYTES_11
55.3
MONOCYTES_12
55.1
MONOCYTES_13
54.8
MONOCYTES_14
54.0
MONOCYTES_15
53.7
MONOCYTES_16
53.0
MONOCYTES_17
53.0
MONOCYTES_18
52.9
MONOCYTES_19
52.4
MONOCYTES_20
52.1
MONOCYTES_21
52.0
MONOCYTES_22
51.9
MONOCYTES_23
51.6
MONOCYTES_24
51.6
MONOCYTES_25
51.4
MONOCYTES_26
51.2
MONOCYTES_27
51.1
MONOCYTES_28
51.1
MONOCYTES_29
50.7
MONOCYTES_30
49.9
MONOCYTES_31
49.0
MONOCYTES_32
48.8
MONOCYTES_33
48.7
MONOCYTES_34
47.7
MONOCYTES_35
47.6
MONOCYTES_36
47.5
MONOCYTES_37
47.5
MONOCYTES_38
47.3
MONOCYTES_39
47.2
MONOCYTES_40
47.0
MONOCYTES_41
46.7
MONOCYTES_42
46.6
MONOCYTES_43
46.4
MONOCYTES_44
46.3
MONOCYTES_45
46.3
MONOCYTES_46
46.1
MONOCYTES_47
45.8
MONOCYTES_48
45.8
MONOCYTES_49
45.6
MONOCYTES_50
45.6
MONOCYTES_51
45.6
MONOCYTES_52
45.5
MONOCYTES_53
45.4
MONOCYTES_54
45.4
MONOCYTES_55
45.4
MONOCYTES_56
45.2
MONOCYTES_57
45.2
MONOCYTES_58
45.0
MONOCYTES_59
44.9
MONOCYTES_60
44.9
MONOCYTES_61
44.8
MONOCYTES_62
44.7
MONOCYTES_63
44.7
MONOCYTES_64
44.7
MONOCYTES_65
44.6
MONOCYTES_66
44.3
MONOCYTES_67
44.1
MONOCYTES_68
44.0
MONOCYTES_69
44.0
MONOCYTES_70
43.6
MONOCYTES_71
43.6
MONOCYTES_72
43.5
MONOCYTES_73
43.2
MONOCYTES_74
43.1
MONOCYTES_75
43.0
MONOCYTES_76
42.9
MONOCYTES_77
42.8
MONOCYTES_78
42.7
MONOCYTES_79
42.6
MONOCYTES_80
42.5
MONOCYTES_81
42.2
MONOCYTES_82
42.1
MONOCYTES_83
41.7
MONOCYTES_84
41.3
MONOCYTES_85
41.2
MONOCYTES_86
40.9
MONOCYTES_87
40.8
MONOCYTES_88
40.7
MONOCYTES_89
39.0
MONOCYTES_90
38.4
MONOCYTES_91
38.2
Show allShow less
Non-classical monocyte TPM: 58.7
Samples: 90
Max TPM: 84.3
Min TPM: 43.5
M2_1
84.3
M2_2
78.2
M2_3
76.9
M2_4
74.3
M2_5
73.2
M2_6
72.9
M2_7
72.6
M2_8
71.0
M2_9
70.5
M2_10
69.8
M2_11
69.8
M2_12
69.7
M2_13
69.2
M2_14
68.6
M2_15
67.7
M2_16
67.6
M2_17
66.4
M2_18
65.9
M2_19
65.6
M2_20
64.7
M2_21
63.2
M2_22
62.8
M2_23
62.7
M2_24
62.4
M2_25
61.0
M2_26
60.0
M2_27
60.0
M2_28
59.7
M2_29
59.6
M2_30
59.6
M2_31
59.6
M2_32
59.6
M2_33
59.4
M2_34
59.4
M2_35
59.1
M2_36
59.0
M2_37
58.9
M2_38
58.7
M2_39
58.4
M2_40
58.3
M2_41
58.1
M2_42
57.5
M2_43
57.5
M2_44
57.3
M2_45
57.2
M2_46
57.2
M2_47
57.1
M2_48
56.9
M2_49
56.8
M2_50
56.8
M2_51
56.5
M2_52
56.1
M2_53
55.9
M2_54
55.8
M2_55
55.7
M2_56
55.6
M2_57
55.5
M2_58
55.3
M2_59
55.0
M2_60
54.8
M2_61
54.7
M2_62
54.6
M2_63
54.5
M2_64
54.5
M2_65
54.4
M2_66
54.3
M2_67
53.9
M2_68
53.7
M2_69
53.1
M2_70
52.8
M2_71
52.7
M2_72
52.5
M2_73
52.4
M2_74
52.3
M2_75
52.3
M2_76
51.9
M2_77
51.6
M2_78
51.4
M2_79
50.6
M2_80
50.5
M2_81
50.5
M2_82
49.6
M2_83
49.5
M2_84
48.5
M2_85
48.3
M2_86
46.7
M2_87
46.6
M2_88
46.3
M2_89
44.2
M2_90
43.5
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Human Protein Atlas project is funded
