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  • TISSUE

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  • PITHD1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:139.8 nTPM
HPA Brain:155.0 nTPM
GTEx:139.8 nTPM
Pig:114.6 nTPM
Mouse:114.8 nTPM
Allen mouse:2.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

155.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 139.3
2226 Male, age 75, left hemisphere 174.3
1961 Female, age 42, unknown 104.2
Dorsomedial nucleus
nTPM: 106.4
2041 Female, age 72, unknown 135.1
2017 Female, age 42, unknown 99.5
1989 Male, age 62, unknown 84.6
Lateral hypothalamic area
nTPM: 155.0
2271 Male, age 75, both hemispheres 193.5
2228 Male, age 66, unknown 160.5
1791 Male, age 80, right hemisphere 154.3
2412 Male, age 62, unknown 111.7
Mammillary body
nTPM: 85.0
1945 Male, age 80, right hemisphere 93.5
1948 Female, age 72, unknown 91.8
1923 Female, age 72, unknown 86.2
2413 Male, age 66, unknown 84.3
1834 Female, age 42, unknown 69.2
Paraventricular nucleus
nTPM: 118.6
2700 Male, age 62, unknown 118.6
Preoptic area
nTPM: 114.0
1907 Male, age 80, right hemisphere 135.2
2414 Female, age 72, unknown 109.5
1861 Female, age 42, unknown 97.4
Supraoptic nucleus
nTPM: 109.0
2835 Female, age 72, unknown 117.4
2043 Male, age 62, unknown 105.4
1894 Female, age 72, unknown 104.4
Ventromedial nucleus
nTPM: 112.0
1982 Female, age 72, unknown 118.9
1822 Female, age 42, unknown 105.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

139.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 139.8
Samples: 257

Max nTPM: 304.5
Min nTPM: 51.4
Std nTPM: 41.7
Median nTPM: 140.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 304.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 257.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 254.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 253.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 249.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 235.1
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 229.9
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 228.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 226.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 220.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 218.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 216.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 213.2
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 213.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 210.1
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 207.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 207.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 205.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 201.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 197.8
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 197.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 194.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 194.0
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 193.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 193.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 193.1
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 192.2
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 190.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 188.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 187.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 186.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 185.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 184.7
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 183.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 183.8
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 182.5
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 181.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 181.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 180.9
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 180.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 180.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 180.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 177.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 177.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 177.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 175.9
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 174.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 174.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 174.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 173.2
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 172.6
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 172.6
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 172.5
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 172.3
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 171.9
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 171.6
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 171.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 169.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 168.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 168.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 168.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 166.9
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 166.8
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 166.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 166.0
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 165.3
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 165.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 164.7
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 161.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 159.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 158.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 157.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 156.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 156.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 156.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 156.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 156.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 156.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 156.1
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 156.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 155.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 155.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 155.4
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 155.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 154.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 154.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 154.5
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 154.0
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 153.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 153.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 152.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 152.7
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 152.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 152.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 152.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 151.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 151.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 151.0
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 150.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 149.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 149.1
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 148.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 148.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 148.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 148.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 148.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 148.1
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 147.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 147.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 147.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 146.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 145.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 145.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 145.3
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 145.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 144.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 144.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 144.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 143.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 143.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 142.9
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 142.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 142.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 141.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 141.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 141.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 141.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 141.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 140.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 139.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 138.7
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 138.5
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 138.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 137.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 136.5
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 136.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 135.9
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 134.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 133.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 133.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 133.1
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 132.6
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 131.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 130.8
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 130.7
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 130.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 130.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 129.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 128.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 128.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 128.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 127.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 126.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 126.4
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 126.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 125.9
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 125.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 124.9
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 124.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 124.5
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 124.3
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 124.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 123.7
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 123.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 122.7
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 122.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 121.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 120.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 119.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 119.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 119.0
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 118.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 117.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 117.6
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 117.5
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 116.9
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 116.9
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 116.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 116.4
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 115.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 115.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 115.1
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 114.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 114.3
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 114.1
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 113.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 113.4
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 113.1
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 112.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 112.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 112.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 111.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 111.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 111.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 110.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 110.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 109.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 109.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 109.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 109.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 108.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 108.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 107.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 105.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 105.5
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 105.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 103.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 101.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 101.6
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 100.4
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 100.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 99.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 98.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 97.9
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 97.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 97.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 95.8
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 95.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 95.1
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 94.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 94.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 91.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 91.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 91.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 91.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 91.1
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 90.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 90.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 89.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 88.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 87.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 86.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 86.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 84.2
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 83.4
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 83.3
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 82.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 82.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 81.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 81.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 81.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 80.7
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 78.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 78.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 76.8
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 75.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 74.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 71.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 69.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 68.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 67.9
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 65.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 64.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 60.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 60.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 55.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 51.4
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

114.6
Pig sample Sample description nTPM
Hypothalamus
nTPM: 114.6
Samples: 4

Max nTPM: 154.1
Min nTPM: 88.5
Sample A Female 154.1
Sample B Female 118.7
Sample C Male 97.2
Sample D Male 88.5

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

114.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 114.8
Samples: 4

Max nTPM: 127.3
Min nTPM: 102.5
Sample A Male 114.1
Sample B Male 127.3
Sample C Female 115.2
Sample D Female 102.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 2.5
71232582 Antisense, RP_050412_01_E11, Mouse strain C57BL/6J (56 days, male) 2.5

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