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BETA
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  • U2AF2
IMMUNE CELL MONOCYTES Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cells
Monocytes
Immune cell methods
MONOCYTES - Expression summary
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA:1.4 nTPM
Monaco:12.3 nTPM
Schmiedel:123.7 TPM

MONOCYTES - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

1.4
HPA sample nTPM
Classical monocyte
nTPM: 1.1
Samples: 6

Max nTPM: 1.7
Min nTPM: 0.6
P10809_1003 0.8
P10809_1020 0.6
P10809_1039 0.9
P10809_1058 1.4
P10809_1080 0.9
P10809_1107 1.7
Intermediate monocyte
nTPM: 1.4
Samples: 6

Max nTPM: 2.0
Min nTPM: 0.8
P10809_1004 1.6
P10809_1023 0.8
P10809_1042 1.4
P10809_1061 2.0
P10809_1081 1.3
P10809_1108 1.4
Non-classical monocyte
nTPM: 1.2
Samples: 5

Max nTPM: 1.9
Min nTPM: 0.3
P10809_1005 1.3
P10809_1053 1.9
P10809_1072 0.3
P10809_1082 1.2
P10809_1109 1.2

MONOCYTES - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

12.3
Monaco sample nTPM
Classical monocyte
nTPM: 7.6
Samples: 4

Max nTPM: 12.2
Min nTPM: 4.7
RHH5313_R3680 5.3
RHH5221_R3593 8.4
RHH5250_R3622 12.2
RHH5279_R3651 4.7
Intermediate monocyte
nTPM: 9.5
Samples: 4

Max nTPM: 14.7
Min nTPM: 3.6
RHH5314_R3681 7.7
RHH5222_R3594 14.7
RHH5251_R3623 12.1
RHH5280_R3652 3.6
Non-classical monocyte
nTPM: 12.3
Samples: 4

Max nTPM: 17.0
Min nTPM: 7.6
RHH5315_R3682 7.6
RHH5223_R3595 16.6
RHH5252_R3624 17.0
RHH5281_R3653 7.9

MONOCYTES - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max subtype TPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

123.7
Schmiedel sample id TPM
Classical monocyte
TPM: 107.9
Samples: 91

Max TPM: 155.2
Min TPM: 58.3
MONOCYTES_1 155.2
MONOCYTES_2 149.1
MONOCYTES_3 148.7
MONOCYTES_4 147.0
MONOCYTES_5 146.3
MONOCYTES_6 143.7
MONOCYTES_7 143.1
MONOCYTES_8 143.0
MONOCYTES_9 142.0
MONOCYTES_10 139.0
MONOCYTES_11 138.7
MONOCYTES_12 138.6
MONOCYTES_13 135.9
MONOCYTES_14 135.8
MONOCYTES_15 134.4
MONOCYTES_16 133.6
MONOCYTES_17 132.4
MONOCYTES_18 132.3
MONOCYTES_19 132.0
MONOCYTES_20 131.9
MONOCYTES_21 130.1
MONOCYTES_22 129.8
MONOCYTES_23 129.1
MONOCYTES_24 126.6
MONOCYTES_25 125.4
MONOCYTES_26 125.0
MONOCYTES_27 123.8
MONOCYTES_28 122.8
MONOCYTES_29 120.8
MONOCYTES_30 120.8
MONOCYTES_31 120.5
MONOCYTES_32 120.5
MONOCYTES_33 120.2
MONOCYTES_34 118.4
MONOCYTES_35 117.3
MONOCYTES_36 114.9
MONOCYTES_37 114.8
MONOCYTES_38 114.7
MONOCYTES_39 113.9
MONOCYTES_40 113.6
MONOCYTES_41 113.4
MONOCYTES_42 112.6
MONOCYTES_43 111.9
MONOCYTES_44 111.5
MONOCYTES_45 110.5
MONOCYTES_46 109.6
MONOCYTES_47 108.4
MONOCYTES_48 107.9
MONOCYTES_49 102.7
MONOCYTES_50 102.4
MONOCYTES_51 102.4
MONOCYTES_52 102.4
MONOCYTES_53 101.8
MONOCYTES_54 101.4
MONOCYTES_55 100.5
MONOCYTES_56 98.4
MONOCYTES_57 98.2
MONOCYTES_58 97.6
MONOCYTES_59 95.6
MONOCYTES_60 94.9
MONOCYTES_61 94.8
MONOCYTES_62 94.3
MONOCYTES_63 94.1
MONOCYTES_64 93.0
MONOCYTES_65 92.9
MONOCYTES_66 92.8
MONOCYTES_67 92.8
MONOCYTES_68 91.9
MONOCYTES_69 91.8
MONOCYTES_70 90.3
MONOCYTES_71 90.1
MONOCYTES_72 89.5
MONOCYTES_73 89.3
MONOCYTES_74 88.0
MONOCYTES_75 86.3
MONOCYTES_76 85.6
MONOCYTES_77 85.3
MONOCYTES_78 83.4
MONOCYTES_79 82.6
MONOCYTES_80 75.2
MONOCYTES_81 71.7
MONOCYTES_82 71.7
MONOCYTES_83 69.8
MONOCYTES_84 67.5
MONOCYTES_85 67.1
MONOCYTES_86 66.0
MONOCYTES_87 64.7
MONOCYTES_88 63.6
MONOCYTES_89 63.5
MONOCYTES_90 59.9
MONOCYTES_91 58.3
Show allShow less
Non-classical monocyte
TPM: 123.7
Samples: 90

Max TPM: 189.5
Min TPM: 37.7
M2_1 189.5
M2_2 186.2
M2_3 184.3
M2_4 176.9
M2_5 176.7
M2_6 174.7
M2_7 173.5
M2_8 172.7
M2_9 167.8
M2_10 164.0
M2_11 164.0
M2_12 163.8
M2_13 163.4
M2_14 163.3
M2_15 162.5
M2_16 161.0
M2_17 160.5
M2_18 160.2
M2_19 156.4
M2_20 155.4
M2_21 154.3
M2_22 153.9
M2_23 152.9
M2_24 149.3
M2_25 148.3
M2_26 147.4
M2_27 147.0
M2_28 146.7
M2_29 145.8
M2_30 145.3
M2_31 144.5
M2_32 142.3
M2_33 141.9
M2_34 140.8
M2_35 140.3
M2_36 140.0
M2_37 139.0
M2_38 138.6
M2_39 137.6
M2_40 136.9
M2_41 136.3
M2_42 135.4
M2_43 135.1
M2_44 132.2
M2_45 132.1
M2_46 131.1
M2_47 131.0
M2_48 127.3
M2_49 126.5
M2_50 126.1
M2_51 124.7
M2_52 120.7
M2_53 119.2
M2_54 117.9
M2_55 115.0
M2_56 114.7
M2_57 114.5
M2_58 113.1
M2_59 112.8
M2_60 112.7
M2_61 111.8
M2_62 111.8
M2_63 109.0
M2_64 100.1
M2_65 99.3
M2_66 98.1
M2_67 94.9
M2_68 94.5
M2_69 94.3
M2_70 94.2
M2_71 92.9
M2_72 90.2
M2_73 86.1
M2_74 85.8
M2_75 81.6
M2_76 78.4
M2_77 76.9
M2_78 71.8
M2_79 71.0
M2_80 68.1
M2_81 66.5
M2_82 66.3
M2_83 65.4
M2_84 65.3
M2_85 63.5
M2_86 63.4
M2_87 60.9
M2_88 45.6
M2_89 41.7
M2_90 37.7
Show allShow less

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