HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:105.0 nTPM
HPA Brain:170.7 nTPM
GTEx:105.0 nTPM
FANTOM5:94.4 Scaled Tags Per Million
Pig:105.2 nTPM
Mouse:256.1 nTPM
Allen mouse:6.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody CAB009729
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 170.7
Sample id Sample description nTPM
Hippocampus
nTPM: 153.8
2621 Female, age 67, right hemisphere 186.1
2148 Female, age 91, left hemisphere 157.1
1898 Male, age 80, left hemisphere 151.9
2529 Female, age 94, left hemisphere 151.9
1855 Male, age 76, left hemisphere 148.4
1911 Female, age 85, right hemisphere 127.2
Dentate gyrus
nTPM: 149.9
2531 Female, age 67, both hemispheres 190.4
2530 Female, age 94, left hemisphere 166.6
1927 Female, age 91, both hemispheres 165.5
2246 Female, age 85, both hemispheres 133.4
2010 Male, age 76, both hemispheres 128.2
2528 Male, age 74, both hemispheres 115.3
Entorhinal gyrus
nTPM: 169.3
2613 Female, age 94, left hemisphere 204.8
2764 Male, age 80, right hemisphere 183.3
2686 Male, age 75, right hemisphere 169.1
1938 Female, age 85, left hemisphere 166.7
1787 Male, age 76, left hemisphere 158.2
2117 Female, age 91, right hemisphere 133.7
Hippocampus, CA1
nTPM: 149.9
2749 Male, age 80, left hemisphere 185.4
2045 Male, age 76, both hemispheres 148.5
1873 Female, age 85, both hemispheres 140.2
2082 Female, age 91, right hemisphere 138.0
2527 Male, age 74, both hemispheres 137.5
Hippocampus, CA2
nTPM: 140.6
1963 Male, age 80, left hemisphere 165.6
1892 Male, age 76, both hemispheres 153.6
2113 Female, age 91, right hemisphere 144.3
2437 Female, age 94, left hemisphere 143.8
1940 Female, age 85, left hemisphere 131.8
2249 Male, age 74, both hemispheres 104.4
Hippocampus, CA3
nTPM: 158.3
2861 Female, age 67, both hemispheres 224.5
2620 Female, age 94, left hemisphere 188.8
2137 Male, age 80, left hemisphere 176.5
1867 Male, age 76, both hemispheres 138.2
1891 Female, age 85, both hemispheres 114.8
2436 Male, age 74, both hemispheres 106.7
Parahippocampal cortex
nTPM: 156.2
2245 Female, age 91, both hemispheres 200.1
2622 Female, age 67, right hemisphere 184.8
2532 Female, age 72, left hemisphere 165.5
1933 Female, age 85, both hemispheres 156.8
1850 Male, age 80, both hemispheres 154.3
2693 Female, age 94, both hemispheres 149.2
1990 Female, age 91, right hemisphere 140.9
2692 Male, age 74, both hemispheres 139.1
2018 Male, age 76, both hemispheres 137.4
2250 Female, age 67, right hemisphere 133.9
Perirhinal gyrus
nTPM: 170.7
1794 Male, age 80, right hemisphere 191.5
1847 Female, age 91, left hemisphere 182.4
1841 Female, age 85, right hemisphere 162.9
2521 Female, age 94, right hemisphere 161.5
2848 Male, age 76, right hemisphere 155.0
Subiculum
nTPM: 127.5
1977 Female, age 85, both hemispheres 138.0
2619 Male, age 74, both hemispheres 136.4
1901 Male, age 80, both hemispheres 129.7
2042 Male, age 76, both hemispheres 120.8
2729 Female, age 91, right hemisphere 120.2
2438 Female, age 94, left hemisphere 120.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 105.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 105.0
Samples: 255

Max nTPM: 283.2
Min nTPM: 24.5
Std nTPM: 39.5
Median nTPM: 101.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 283.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 260.0
GTEX-1JJEA-0011-R1b-SM-F6495 60-69 years, male 233.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 188.5
GTEX-ZZPT-0011-R1b-SM-GNINL 50-59 years, male 186.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 185.4
GTEX-1192X-0011-R1b-SM-GI4VU 50-59 years, male 184.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 182.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 180.1
GTEX-117XS-0011-R1b-SM-GJ3PQ 60-69 years, male 176.5
GTEX-1JJ6O-0011-R1b-SM-F2I2M 60-69 years, male 176.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 94.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 94.4
FF:10169-103B7 60 years, female 99.7
FF:10153-102I9 76 years, female 89.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 105.2
Pig sample Sample description nTPM
Subiculum
nTPM: 91.3
Samples: 4

Max nTPM: 124.2
Min nTPM: 72.6
Sample A Female 124.2
Sample B Female 78.7
Sample C Male 89.5
Sample D Male 72.6
Dorsal hippocampus
nTPM: 95.8
Samples: 4

Max nTPM: 118.2
Min nTPM: 82.1
Sample A Female 118.2
Sample B Female 94.4
Sample C Male 88.5
Sample D Male 82.1
Entorhinal cortex
nTPM: 105.2
Samples: 4

Max nTPM: 112.3
Min nTPM: 97.5
Sample A Female 107.6
Sample B Female 103.2
Sample C Male 112.3
Sample D Male 97.5
Ventral hippocampus
nTPM: 97.9
Samples: 4

Max nTPM: 123.8
Min nTPM: 67.7
Sample A Female 94.2
Sample B Female 67.7
Sample C Male 123.8
Sample D Male 105.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 256.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 229.5
Samples: 4

Max nTPM: 233.2
Min nTPM: 223.4
Sample A Male 229.8
Sample B Male 233.2
Sample C Female 223.4
Sample D Female 231.6
Hippocampal formation
nTPM: 256.1
Samples: 4

Max nTPM: 273.8
Min nTPM: 243.0
Sample A Male 255.1
Sample B Male 252.4
Sample C Female 243.0
Sample D Female 273.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 6.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.8
76003523 Antisense, RP_060608_02_F04, Mouse strain C57BL/6J (56 days, male) 6.8

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