A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
210.5
nTPM
Monaco:
604.5
nTPM
Schmiedel:
141.2
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
210.5
HPA sample
nTPM
Classical monocyte nTPM: 142.3
Samples: 6
Max nTPM: 234.4
Min nTPM: 83.6
P10809_1003
234.4
P10809_1020
132.6
P10809_1039
83.6
P10809_1058
111.4
P10809_1080
143.6
P10809_1107
148.3
Intermediate monocyte nTPM: 180.8
Samples: 6
Max nTPM: 225.2
Min nTPM: 156.3
P10809_1004
225.2
P10809_1023
156.3
P10809_1042
168.1
P10809_1061
174.3
P10809_1081
160.9
P10809_1108
199.7
Non-classical monocyte nTPM: 210.5
Samples: 5
Max nTPM: 299.8
Min nTPM: 123.4
P10809_1005
299.8
P10809_1053
123.4
P10809_1072
293.7
P10809_1082
147.5
P10809_1109
187.9
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
604.5
Monaco sample
nTPM
Classical monocyte nTPM: 562.9
Samples: 4
Max nTPM: 601.2
Min nTPM: 507.8
RHH5313_R3680
590.5
RHH5221_R3593
601.2
RHH5250_R3622
507.8
RHH5279_R3651
552.0
Intermediate monocyte nTPM: 542.5
Samples: 4
Max nTPM: 580.7
Min nTPM: 445.4
RHH5314_R3681
574.0
RHH5222_R3594
569.8
RHH5251_R3623
445.4
RHH5280_R3652
580.7
Non-classical monocyte nTPM: 604.5
Samples: 4
Max nTPM: 700.6
Min nTPM: 539.9
RHH5315_R3682
700.6
RHH5223_R3595
600.6
RHH5252_R3624
577.0
RHH5281_R3653
539.9
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
141.2
Schmiedel sample id
TPM
Classical monocyte TPM: 141.2
Samples: 91
Max TPM: 214.6
Min TPM: 63.1
MONOCYTES_1
214.6
MONOCYTES_2
200.2
MONOCYTES_3
191.3
MONOCYTES_4
191.1
MONOCYTES_5
190.6
MONOCYTES_6
190.5
MONOCYTES_7
188.5
MONOCYTES_8
188.0
MONOCYTES_9
186.0
MONOCYTES_10
185.2
MONOCYTES_11
184.5
MONOCYTES_12
181.3
MONOCYTES_13
177.4
MONOCYTES_14
177.3
MONOCYTES_15
177.3
MONOCYTES_16
175.5
MONOCYTES_17
175.1
MONOCYTES_18
174.7
MONOCYTES_19
174.6
MONOCYTES_20
173.4
MONOCYTES_21
172.4
MONOCYTES_22
170.5
MONOCYTES_23
168.8
MONOCYTES_24
166.4
MONOCYTES_25
164.5
MONOCYTES_26
162.7
MONOCYTES_27
159.8
MONOCYTES_28
159.7
MONOCYTES_29
159.3
MONOCYTES_30
158.5
MONOCYTES_31
158.0
MONOCYTES_32
156.5
MONOCYTES_33
155.3
MONOCYTES_34
155.0
MONOCYTES_35
151.6
MONOCYTES_36
150.8
MONOCYTES_37
150.0
MONOCYTES_38
147.7
MONOCYTES_39
147.3
MONOCYTES_40
146.7
MONOCYTES_41
145.0
MONOCYTES_42
143.7
MONOCYTES_43
143.5
MONOCYTES_44
143.3
MONOCYTES_45
142.0
MONOCYTES_46
142.0
MONOCYTES_47
141.8
MONOCYTES_48
141.1
MONOCYTES_49
140.6
MONOCYTES_50
139.1
MONOCYTES_51
138.1
MONOCYTES_52
137.5
MONOCYTES_53
134.3
MONOCYTES_54
133.9
MONOCYTES_55
133.8
MONOCYTES_56
132.7
MONOCYTES_57
130.0
MONOCYTES_58
129.2
MONOCYTES_59
126.6
MONOCYTES_60
126.4
MONOCYTES_61
124.5
MONOCYTES_62
124.2
MONOCYTES_63
123.7
MONOCYTES_64
122.3
MONOCYTES_65
121.2
MONOCYTES_66
119.6
MONOCYTES_67
118.9
MONOCYTES_68
118.3
MONOCYTES_69
117.4
MONOCYTES_70
116.7
MONOCYTES_71
115.1
MONOCYTES_72
114.8
MONOCYTES_73
113.7
MONOCYTES_74
112.5
MONOCYTES_75
107.2
MONOCYTES_76
106.3
MONOCYTES_77
105.8
MONOCYTES_78
105.3
MONOCYTES_79
104.4
MONOCYTES_80
102.1
MONOCYTES_81
101.6
MONOCYTES_82
97.1
MONOCYTES_83
93.3
MONOCYTES_84
92.9
MONOCYTES_85
91.9
MONOCYTES_86
90.5
MONOCYTES_87
85.3
MONOCYTES_88
85.2
MONOCYTES_89
75.6
MONOCYTES_90
74.4
MONOCYTES_91
63.1
Show allShow less
Non-classical monocyte TPM: 139.3
Samples: 90
Max TPM: 236.1
Min TPM: 51.1
M2_1
236.1
M2_2
222.7
M2_3
217.5
M2_4
213.9
M2_5
212.5
M2_6
206.8
M2_7
204.8
M2_8
203.8
M2_9
203.1
M2_10
198.5
M2_11
198.3
M2_12
194.7
M2_13
188.1
M2_14
188.0
M2_15
183.2
M2_16
179.5
M2_17
179.2
M2_18
178.7
M2_19
178.6
M2_20
178.5
M2_21
177.1
M2_22
174.3
M2_23
171.7
M2_24
170.4
M2_25
170.2
M2_26
168.6
M2_27
167.3
M2_28
166.6
M2_29
163.2
M2_30
159.2
M2_31
157.9
M2_32
155.1
M2_33
154.8
M2_34
153.7
M2_35
153.6
M2_36
153.5
M2_37
153.3
M2_38
152.3
M2_39
152.2
M2_40
149.5
M2_41
147.2
M2_42
146.9
M2_43
146.5
M2_44
144.2
M2_45
143.5
M2_46
142.5
M2_47
141.9
M2_48
139.5
M2_49
139.4
M2_50
138.8
M2_51
138.1
M2_52
133.5
M2_53
132.6
M2_54
132.3
M2_55
131.6
M2_56
127.5
M2_57
121.6
M2_58
118.1
M2_59
117.2
M2_60
116.6
M2_61
116.3
M2_62
115.9
M2_63
114.1
M2_64
112.9
M2_65
108.1
M2_66
106.5
M2_67
105.2
M2_68
104.0
M2_69
102.9
M2_70
102.1
M2_71
100.2
M2_72
98.8
M2_73
98.1
M2_74
98.1
M2_75
97.2
M2_76
92.0
M2_77
89.2
M2_78
86.5
M2_79
82.5
M2_80
78.4
M2_81
78.3
M2_82
74.8
M2_83
65.5
M2_84
64.6
M2_85
64.1
M2_86
62.9
M2_87
60.1
M2_88
58.0
M2_89
55.6
M2_90
51.1
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.