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  • TISSUE

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  • FGFR2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:50.4 nTPM
HPA Brain:138.4 nTPM
GTEx:50.4 nTPM
Pig:39.1 nTPM
Mouse:31.9 nTPM
Allen mouse:0.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

138.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 26.5
2226 Male, age 75, left hemisphere 29.5
1961 Female, age 42, unknown 23.5
Dorsomedial nucleus
nTPM: 51.2
2017 Female, age 42, unknown 74.3
1989 Male, age 62, unknown 57.4
2041 Female, age 72, unknown 21.9
Lateral hypothalamic area
nTPM: 74.8
2228 Male, age 66, unknown 97.5
2271 Male, age 75, both hemispheres 96.2
1791 Male, age 80, right hemisphere 59.4
2412 Male, age 62, unknown 45.9
Mammillary body
nTPM: 138.4
1945 Male, age 80, right hemisphere 177.8
1948 Female, age 72, unknown 151.7
1834 Female, age 42, unknown 146.7
1923 Female, age 72, unknown 108.4
2413 Male, age 66, unknown 107.4
Paraventricular nucleus
nTPM: 87.0
2700 Male, age 62, unknown 87.0
Preoptic area
nTPM: 82.1
2414 Female, age 72, unknown 140.6
1861 Female, age 42, unknown 77.7
1907 Male, age 80, right hemisphere 28.0
Supraoptic nucleus
nTPM: 83.8
2043 Male, age 62, unknown 115.2
1894 Female, age 72, unknown 86.1
2835 Female, age 72, unknown 50.1
Ventromedial nucleus
nTPM: 21.7
1822 Female, age 42, unknown 22.4
1982 Female, age 72, unknown 21.0

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

50.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 50.4
Samples: 257

Max nTPM: 791.2
Min nTPM: 3.1
Std nTPM: 73.6
Median nTPM: 29.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 791.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 428.3
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 329.6
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 277.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 250.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 240.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 237.2
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 228.9
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 218.3
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 203.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 184.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 167.7
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 166.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 165.9
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 163.4
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 160.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 152.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 148.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 148.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 141.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 139.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 124.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 122.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 121.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 119.1
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 115.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 114.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 112.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 108.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 107.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 101.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 98.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 96.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 94.6
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 93.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 93.0
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 91.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 87.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 87.1
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 85.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 81.6
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 78.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 75.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 75.1
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 73.9
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 73.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 72.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 72.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 72.0
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 71.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 69.8
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 66.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 65.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 64.4
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 63.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 63.7
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 62.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 62.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 61.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 61.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 60.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 59.7
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 59.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 58.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 57.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 55.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 55.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 54.2
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 53.3
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 52.4
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 52.2
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 50.6
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 49.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 49.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 48.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 47.0
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 46.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 46.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 44.9
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 44.4
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 44.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 43.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 43.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 42.9
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 42.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 42.0
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 41.1
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 41.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 40.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 40.6
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 40.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 40.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 39.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 39.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 38.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 38.6
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 38.4
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 37.2
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 37.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 36.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 36.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 36.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 36.5
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 36.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 35.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 35.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 34.9
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 34.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 34.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 34.5
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 34.4
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 34.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 34.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 33.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 33.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 32.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 32.4
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 31.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 31.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 31.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 30.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 30.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 30.2
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 30.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 29.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 29.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 29.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 29.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 29.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 28.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 28.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 27.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 27.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 27.3
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 26.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 26.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 26.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 25.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 24.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 23.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 23.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 23.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 23.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 23.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 22.8
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 22.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 22.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 22.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 21.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 21.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 20.9
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 20.8
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 20.8
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 20.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 20.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 20.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 19.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 19.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 19.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 19.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 19.2
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 19.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 19.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 18.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 18.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 18.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 18.6
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 18.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 18.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 17.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 17.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 17.5
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 17.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 16.8
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 16.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 16.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 15.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 15.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 15.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 15.3
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 15.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 15.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 15.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 14.7
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 14.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 13.9
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 13.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 13.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 13.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 13.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 12.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 12.9
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 12.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 12.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 12.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 12.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 12.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 12.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 12.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 12.1
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 12.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 12.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 11.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 11.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 11.9
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 11.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 11.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 11.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 11.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 11.2
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 11.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 10.9
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 10.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 10.8
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 10.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 10.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 10.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 10.4
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 10.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 10.0
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 10.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 9.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 9.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 9.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 9.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 9.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 9.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 9.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 9.4
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 9.3
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 9.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 9.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 9.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 9.0
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 8.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 8.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 8.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 8.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 8.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 7.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 7.7
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 7.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 7.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 7.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 6.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 6.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 5.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 5.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 5.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 5.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 4.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 4.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 4.1
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 3.8
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 3.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 3.4
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 3.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

39.1
Pig sample Sample description nTPM
Hypothalamus
nTPM: 39.2
Samples: 4

Max nTPM: 44.5
Min nTPM: 31.3
Sample A Female 38.9
Sample B Female 41.9
Sample C Male 44.5
Sample D Male 31.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

31.9
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 31.9
Samples: 4

Max nTPM: 34.3
Min nTPM: 29.8
Sample A Male 30.9
Sample B Male 29.8
Sample C Female 32.7
Sample D Female 34.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.8
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.8
100145368 Antisense, RP_110519_03_D04, Mouse strain C57BL/6J (56 days, male) 1.5
445 Antisense, RP_Baylor_102780, Mouse strain C57BL/6J (56 days, male) 0.1

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