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  • SUMMARY

  • TISSUE

  • BRAIN

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  • SYT1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

87.901
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:79.0 nTPM
HPA Brain:328.5 nTPM
GTEx:79.0 nTPM
Pig:126.5 nTPM
Mouse:333.5 nTPM
Allen mouse:9.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody HPA008394
Hypothalamus mean intensity 87.901
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus 28.964
Mammillary nucleus 42.754
Periventricular hypothalamic nucleus 86.656
Supraoptic nucleus -
Tuberal nucleus 87.901
Ventral tuberomammillary nucleus 38.749
Lateral preoptic area 37.844
Medial preoptic area 40.749
Suprachiasmatic nucleus -
Paraventricular hypothalamic nucleus -
Anterior hypothalamic area, central -
Ventral medial hypothalamic nucleus 35.079
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 68.956
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 17.010
Dorsal medial hypothalamic nucleus 35.970
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

328.5
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 258.0
2226 Male, age 75, left hemisphere 390.4
1961 Female, age 42, unknown 125.6
Dorsomedial nucleus
nTPM: 198.0
1989 Male, age 62, unknown 343.4
2017 Female, age 42, unknown 132.3
2041 Female, age 72, unknown 118.3
Lateral hypothalamic area
nTPM: 328.5
2228 Male, age 66, unknown 460.8
2271 Male, age 75, both hemispheres 459.0
1791 Male, age 80, right hemisphere 251.6
2412 Male, age 62, unknown 142.5
Mammillary body
nTPM: 206.0
1923 Female, age 72, unknown 365.6
2413 Male, age 66, unknown 271.7
1948 Female, age 72, unknown 159.0
1834 Female, age 42, unknown 134.4
1945 Male, age 80, right hemisphere 99.5
Paraventricular nucleus
nTPM: 123.0
2700 Male, age 62, unknown 123.0
Preoptic area
nTPM: 179.5
1907 Male, age 80, right hemisphere 259.5
2414 Female, age 72, unknown 151.0
1861 Female, age 42, unknown 127.9
Supraoptic nucleus
nTPM: 101.2
1894 Female, age 72, unknown 128.4
2835 Female, age 72, unknown 120.6
2043 Male, age 62, unknown 54.6
Ventromedial nucleus
nTPM: 126.9
1982 Female, age 72, unknown 128.3
1822 Female, age 42, unknown 125.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

79.0
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 79.0
Samples: 257

Max nTPM: 355.5
Min nTPM: 1.6
Std nTPM: 51.4
Median nTPM: 70.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 355.5
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 329.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 248.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 239.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 227.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 213.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 212.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 212.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 197.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 190.6
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 181.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 176.6
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 175.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 172.3
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 168.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 161.0
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 156.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 156.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 156.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 155.8
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 151.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 146.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 143.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 138.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 136.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 131.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 131.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 128.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 128.7
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 128.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 128.0
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 127.4
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 126.5
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 122.3
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 120.0
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 118.8
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 118.5
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 117.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 117.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 117.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 116.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 116.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 116.2
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 115.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 115.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 114.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 114.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 114.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 113.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 113.5
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 113.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 112.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 112.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 110.8
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 110.6
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 109.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 109.2
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 108.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 108.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 107.2
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 106.9
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 106.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 106.4
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 106.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 105.0
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 104.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 103.2
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 103.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 102.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 101.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 101.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 100.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 100.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 98.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 98.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 96.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 95.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 95.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 94.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 94.4
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 94.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 93.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 93.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 92.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 91.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 91.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 90.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 90.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 90.4
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 89.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 89.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 89.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 89.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 88.9
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 88.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 88.6
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 88.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 88.4
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 88.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 87.1
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 85.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 84.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 83.0
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 82.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 82.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 82.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 81.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 81.1
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 81.1
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 80.3
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 80.0
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 79.9
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 79.0
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 78.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 78.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 78.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 77.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 76.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 76.6
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 76.6
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 76.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 75.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 75.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 75.6
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 75.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 74.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 71.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 71.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 70.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 69.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 69.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 69.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 68.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 68.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 67.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 67.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 67.3
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 66.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 65.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 65.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 65.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 63.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 63.0
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 62.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 62.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 62.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 61.8
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 61.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 61.1
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 60.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 60.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 59.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 59.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 59.1
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 59.1
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 56.9
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 56.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 56.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 55.9
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 55.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 54.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 54.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 54.1
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 53.8
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 53.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 53.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 52.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 52.1
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 51.8
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 51.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 51.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 50.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 50.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 50.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 48.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 48.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 48.0
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 47.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 47.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 47.3
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 47.3
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 47.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 45.9
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 45.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 44.9
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 44.8
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 44.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 43.9
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 43.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 43.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 42.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 41.3
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 41.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 41.0
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 39.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 39.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 39.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 39.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 38.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 38.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 37.7
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 37.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 37.4
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 36.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 36.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 36.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 36.0
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 36.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 35.9
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 35.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 35.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 34.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 34.5
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 34.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 33.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 33.9
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 33.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 32.6
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 32.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 31.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 31.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 31.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 31.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 31.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 31.1
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 30.0
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 29.8
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 29.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 28.8
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 28.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 28.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 28.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 27.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 25.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 22.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 22.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 21.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 21.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 20.5
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 20.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 19.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 19.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 18.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 17.9
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 17.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 15.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 15.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 13.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 13.2
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 11.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 11.7
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 11.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 8.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 6.9
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 6.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 3.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 1.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

126.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 126.5
Samples: 4

Max nTPM: 165.5
Min nTPM: 91.7
Sample A Female 165.5
Sample B Female 113.3
Sample C Male 135.4
Sample D Male 91.7

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

333.5
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 333.5
Samples: 4

Max nTPM: 348.8
Min nTPM: 317.4
Sample A Male 317.4
Sample B Male 348.8
Sample C Female 333.0
Sample D Female 334.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

9.9
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 9.9
1015 Antisense, RP_Baylor_103052, Mouse strain C57BL/6J (56 days, male) 19.8
1014 Antisense, RP_Baylor_103052, Mouse strain C57BL/6J (56 days, male) 18.7
1016 Sense, RPS_Baylor_37049, Mouse strain C57BL/6J (56 days, male) 0.0

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