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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • SYT1
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:147.8 nTPM
GTEx:44.9 nTPM
FANTOM5:236.4 Scaled Tags Per Million
Macaque:225.4 nTPM
Pig:246.8 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

147.8
Sample id Sample description nTPM
Putamen
nTPM: 147.8
1937 Female, age 91, right hemisphere 226.3
1838 Male, age 80, right hemisphere 193.9
1829 Male, age 74, unknown 152.1
2466 Female, age 79, unknown 143.8
2647 Male, age 75, left hemisphere 128.6
2482 Female, age 94, left hemisphere 99.1
2489 Female, age 72, unknown 91.1

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

44.9
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 44.9
Samples: 254

Max nTPM: 208.4
Min nTPM: 1.1
Std nTPM: 31.8
Median nTPM: 42.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 208.4
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 143.5
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 128.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 124.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 112.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 108.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 107.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 107.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 103.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 102.0
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 101.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 101.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 97.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 95.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 94.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 94.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 92.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 92.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 92.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 90.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 89.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 89.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 89.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 88.6
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 86.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 85.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 85.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 84.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 83.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 82.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 81.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 80.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 80.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 80.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 80.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 80.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 79.4
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 78.9
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 78.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 78.0
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 77.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 76.7
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 75.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 75.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 75.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 74.8
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 74.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 73.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 73.3
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 73.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 73.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 73.0
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 71.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 69.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 69.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 68.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 68.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 67.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 66.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 66.6
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 65.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 65.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 64.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 64.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 64.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 64.7
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 64.2
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 64.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 63.3
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 63.0
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 61.3
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 61.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 60.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 59.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 59.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 59.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 59.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 59.5
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 58.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 58.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 58.4
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 58.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 57.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 57.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 57.3
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 57.3
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 57.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 57.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 57.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 56.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 55.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 55.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 55.8
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 55.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 54.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 54.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 53.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 53.6
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 53.4
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 53.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 53.1
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 52.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 52.4
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 52.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 51.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 51.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 51.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 50.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 50.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 50.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 49.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 49.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 49.1
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 48.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 48.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 48.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 47.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 47.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 47.0
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 46.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 45.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 45.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 45.2
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 44.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 44.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 43.8
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 42.9
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 42.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 42.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 42.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 42.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 41.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 41.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 40.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 40.0
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 39.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 39.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 38.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 38.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 37.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 37.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 37.7
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 36.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 35.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 35.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 35.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 34.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 33.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 33.8
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 32.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 32.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 31.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 31.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 31.5
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 30.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 30.2
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 29.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 29.2
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 28.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 28.8
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 28.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 28.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 28.4
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 28.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 28.1
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 27.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 27.5
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 26.7
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 26.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 26.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 25.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 25.1
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 25.1
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 24.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 24.0
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 23.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 23.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 21.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 21.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 20.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 20.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 20.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 20.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 19.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 18.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 18.9
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 18.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 18.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 18.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 18.1
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 17.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 16.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 16.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 15.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 15.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 15.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 15.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 14.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 14.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 14.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 14.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 14.3
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 13.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 13.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 12.2
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 12.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 11.8
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 11.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 11.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 11.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 11.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 11.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 10.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 10.2
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 10.0
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 9.8
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 9.7
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 9.4
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 9.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 8.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 8.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 8.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 8.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 7.4
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 7.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 7.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 7.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 7.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 6.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 5.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 5.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 5.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 5.3
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 5.0
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 4.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 4.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 4.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 3.6
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 3.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 3.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 3.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 3.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 2.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 2.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 2.5
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 2.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 2.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 2.1
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 1.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 1.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1.6
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 1.5
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 1.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1.1
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

236.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 236.4
FF:10176-103C5 60 years, female 236.4

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

225.4
Macaque sample Sample description nTPM
Putamen
nTPM: 225.4
Samples: 2

Max nTPM: 248.4
Min nTPM: 202.3
Sample A 202.3
Sample B 248.4

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

246.8
Pig sample Sample description nTPM
Putamen
nTPM: 246.8
Samples: 3

Max nTPM: 344.2
Min nTPM: 191.7
Sample B Female 191.7
Sample C Male 344.2
Sample D Male 204.5

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