HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:193.2 nTPM
HPA Brain:74.0 nTPM
GTEx:193.2 nTPM
FANTOM5:186.7 Scaled Tags Per Million
Pig:180.5 nTPM
Mouse:164.6 nTPM
Allen mouse:7.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA011165Antibody CAB004573
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 74.0
Sample id Sample description nTPM
Hippocampus
nTPM: 58.1
2529 Female, age 94, left hemisphere 65.9
2621 Female, age 67, right hemisphere 64.5
1898 Male, age 80, left hemisphere 60.9
1911 Female, age 85, right hemisphere 59.1
1855 Male, age 76, left hemisphere 50.5
2148 Female, age 91, left hemisphere 47.8
Dentate gyrus
nTPM: 55.7
2530 Female, age 94, left hemisphere 87.9
2528 Male, age 74, both hemispheres 60.6
2010 Male, age 76, both hemispheres 55.4
2246 Female, age 85, both hemispheres 45.3
2531 Female, age 67, both hemispheres 45.3
1927 Female, age 91, both hemispheres 39.5
Entorhinal gyrus
nTPM: 64.8
2117 Female, age 91, right hemisphere 97.9
2764 Male, age 80, right hemisphere 71.3
2686 Male, age 75, right hemisphere 57.4
1938 Female, age 85, left hemisphere 57.2
2613 Female, age 94, left hemisphere 56.1
1787 Male, age 76, left hemisphere 48.7
Hippocampus, CA1
nTPM: 47.9
2527 Male, age 74, both hemispheres 55.9
2082 Female, age 91, right hemisphere 52.2
1873 Female, age 85, both hemispheres 51.9
2749 Male, age 80, left hemisphere 46.7
2045 Male, age 76, both hemispheres 32.8
Hippocampus, CA2
nTPM: 57.5
1963 Male, age 80, left hemisphere 68.1
2249 Male, age 74, both hemispheres 64.7
2437 Female, age 94, left hemisphere 62.3
2113 Female, age 91, right hemisphere 55.2
1940 Female, age 85, left hemisphere 51.1
1892 Male, age 76, both hemispheres 43.6
Hippocampus, CA3
nTPM: 44.7
1891 Female, age 85, both hemispheres 64.7
1867 Male, age 76, both hemispheres 48.8
2436 Male, age 74, both hemispheres 47.2
2861 Female, age 67, both hemispheres 37.9
2620 Female, age 94, left hemisphere 35.4
2137 Male, age 80, left hemisphere 34.1
Parahippocampal cortex
nTPM: 51.8
2692 Male, age 74, both hemispheres 64.6
2532 Female, age 72, left hemisphere 62.3
1850 Male, age 80, both hemispheres 56.2
1990 Female, age 91, right hemisphere 54.7
2245 Female, age 91, both hemispheres 53.0
1933 Female, age 85, both hemispheres 52.7
2018 Male, age 76, both hemispheres 51.4
2693 Female, age 94, both hemispheres 43.0
2250 Female, age 67, right hemisphere 41.2
2622 Female, age 67, right hemisphere 38.3
Perirhinal gyrus
nTPM: 45.3
1847 Female, age 91, left hemisphere 48.8
1794 Male, age 80, right hemisphere 47.4
2848 Male, age 76, right hemisphere 43.8
1841 Female, age 85, right hemisphere 43.5
2521 Female, age 94, right hemisphere 42.9
Subiculum
nTPM: 74.0
2042 Male, age 76, both hemispheres 100.8
1901 Male, age 80, both hemispheres 80.5
2438 Female, age 94, left hemisphere 71.4
2619 Male, age 74, both hemispheres 68.7
1977 Female, age 85, both hemispheres 66.8
2729 Female, age 91, right hemisphere 55.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 193.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 193.2
Samples: 255

Max nTPM: 599.6
Min nTPM: 77.1
Std nTPM: 82.6
Median nTPM: 170.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 599.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 549.9
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 505.3
GTEX-1JN6P-0011-R1b-SM-G8LL3 60-69 years, male 421.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 410.8
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 397.3
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 390.7
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 387.6
GTEX-14DAQ-0011-R1a-SM-G8W85 60-69 years, female 381.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 375.2
GTEX-13PLJ-0011-R1a-SM-GJ3QF 60-69 years, female 364.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 186.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 186.7
FF:10153-102I9 76 years, female 236.5
FF:10169-103B7 60 years, female 137.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 180.5
Pig sample Sample description nTPM
Subiculum
nTPM: 123.7
Samples: 4

Max nTPM: 159.2
Min nTPM: 105.8
Sample A Female 159.2
Sample B Female 116.6
Sample C Male 113.1
Sample D Male 105.8
Dorsal hippocampus
nTPM: 180.5
Samples: 4

Max nTPM: 268.2
Min nTPM: 98.7
Sample A Female 268.2
Sample B Female 139.5
Sample C Male 215.4
Sample D Male 98.7
Entorhinal cortex
nTPM: 124.7
Samples: 4

Max nTPM: 134.8
Min nTPM: 104.5
Sample A Female 130.2
Sample B Female 134.8
Sample C Male 129.4
Sample D Male 104.5
Ventral hippocampus
nTPM: 148.1
Samples: 4

Max nTPM: 176.1
Min nTPM: 100.7
Sample A Female 163.7
Sample B Female 100.7
Sample C Male 176.1
Sample D Male 151.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 164.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 125.3
Samples: 4

Max nTPM: 152.7
Min nTPM: 96.6
Sample A Male 152.7
Sample B Male 118.9
Sample C Female 133.0
Sample D Female 96.6
Hippocampal formation
nTPM: 164.6
Samples: 4

Max nTPM: 186.4
Min nTPM: 144.8
Sample A Male 146.8
Sample B Male 144.8
Sample C Female 186.4
Sample D Female 180.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 7.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.8
75651224 Antisense, RP_060518_01_D02, Mouse strain C57BL/6J (56 days, male) 9.1
74990520 Antisense, RP_060410_01_C02, Mouse strain C57BL/6J (56 days, male) 6.6

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