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  • SUMMARY

  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:128.3 nTPM
HPA Brain:96.4 nTPM
GTEx:128.3 nTPM
Pig:170.0 nTPM
Mouse:140.4 nTPM
Allen mouse:8.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

96.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 28.5
2226 Male, age 75, left hemisphere 31.8
1961 Female, age 42, unknown 25.3
Dorsomedial nucleus
nTPM: 48.5
2017 Female, age 42, unknown 61.0
1989 Male, age 62, unknown 50.4
2041 Female, age 72, unknown 34.0
Lateral hypothalamic area
nTPM: 67.5
2228 Male, age 66, unknown 90.1
2271 Male, age 75, both hemispheres 79.3
1791 Male, age 80, right hemisphere 57.0
2412 Male, age 62, unknown 43.8
Mammillary body
nTPM: 96.4
1945 Male, age 80, right hemisphere 109.8
1834 Female, age 42, unknown 107.2
1948 Female, age 72, unknown 99.8
1923 Female, age 72, unknown 87.0
2413 Male, age 66, unknown 78.1
Paraventricular nucleus
nTPM: 83.3
2700 Male, age 62, unknown 83.3
Preoptic area
nTPM: 62.2
2414 Female, age 72, unknown 85.8
1861 Female, age 42, unknown 65.6
1907 Male, age 80, right hemisphere 35.1
Supraoptic nucleus
nTPM: 71.0
2043 Male, age 62, unknown 91.4
1894 Female, age 72, unknown 67.8
2835 Female, age 72, unknown 53.9
Ventromedial nucleus
nTPM: 29.5
1982 Female, age 72, unknown 32.0
1822 Female, age 42, unknown 26.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

128.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 128.3
Samples: 257

Max nTPM: 508.1
Min nTPM: 33.8
Std nTPM: 75.3
Median nTPM: 101.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 508.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 440.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 438.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 398.9
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 345.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 340.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 334.8
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 329.9
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 322.3
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 308.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 303.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 301.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 278.2
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 274.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 269.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 265.3
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 263.7
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 263.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 258.9
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 258.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 257.7
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 253.8
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 244.1
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 241.8
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 237.6
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 229.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 228.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 223.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 218.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 212.1
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 209.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 205.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 204.2
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 203.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 202.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 202.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 198.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 198.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 198.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 195.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 195.6
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 194.3
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 185.4
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 184.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 184.5
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 183.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 181.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 180.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 180.8
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 176.1
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 175.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 172.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 172.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 172.2
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 171.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 171.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 164.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 164.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 164.0
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 161.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 161.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 158.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 158.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 152.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 151.2
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 150.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 147.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 146.9
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 146.5
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 145.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 144.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 143.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 143.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 142.6
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 140.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 140.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 139.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 135.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 135.5
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 135.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 132.6
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 132.3
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 130.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 129.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 128.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 128.2
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 127.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 127.1
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 126.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 124.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 124.7
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 124.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 121.4
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 121.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 121.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 120.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 119.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 119.1
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 118.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 117.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 117.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 116.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 116.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 115.4
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 114.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 114.0
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 113.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 113.2
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 112.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 111.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 111.6
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 111.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 111.4
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 111.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 111.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 111.0
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 110.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 109.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 109.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 108.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 108.8
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 107.7
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 107.4
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 106.6
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 105.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 104.3
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 103.0
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 102.4
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 101.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 100.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 100.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 99.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 99.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 98.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 98.8
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 98.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 97.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 97.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 97.1
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 96.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 96.6
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 96.5
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 96.1
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 94.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 93.8
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 93.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 93.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 93.2
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 93.2
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 92.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 92.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 92.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 91.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 91.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 91.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 91.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 91.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 90.5
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 89.5
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 89.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 88.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 88.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 88.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 88.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 87.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 87.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 87.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 87.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 87.4
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 87.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 86.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 85.7
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 85.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 84.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 84.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 84.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 84.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 84.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 83.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 83.3
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 83.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 82.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 82.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 82.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 82.4
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 81.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 81.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 80.4
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 80.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 80.1
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 80.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 79.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 79.8
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 79.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 78.8
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 77.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 77.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 77.7
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 77.5
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 77.4
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 76.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 76.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 76.4
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 75.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 75.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 75.1
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 75.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 74.9
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 74.8
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 74.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 72.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 72.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 72.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 72.2
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 71.1
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 70.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 70.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 70.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 69.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 69.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 68.8
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 68.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 67.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 67.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 67.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 67.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 66.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 66.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 66.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 65.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 64.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 64.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 64.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 64.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 64.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 63.7
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 63.3
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 62.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 62.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 61.5
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 61.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 60.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 59.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 59.5
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 59.0
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 58.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 58.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 57.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 55.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 54.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 53.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 52.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 51.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 50.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 45.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 39.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 33.8
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

170.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 170.0
Samples: 4

Max nTPM: 225.8
Min nTPM: 99.5
Sample A Female 225.8
Sample B Female 172.4
Sample C Male 182.3
Sample D Male 99.5

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

140.4
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 140.4
Samples: 4

Max nTPM: 147.8
Min nTPM: 130.5
Sample A Male 130.5
Sample B Male 139.8
Sample C Female 143.5
Sample D Female 147.8

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

8.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 8.5
75651224 Antisense, RP_060518_01_D02, Mouse strain C57BL/6J (56 days, male) 9.9
74990520 Antisense, RP_060410_01_C02, Mouse strain C57BL/6J (56 days, male) 7.0

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