HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:160.8 nTPM
HPA Brain:414.4 nTPM
GTEx:160.8 nTPM
FANTOM5:142.7 Scaled Tags Per Million
Pig:180.4 nTPM
Mouse:315.3 nTPM
Allen mouse:8.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody CAB001975
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 414.4
Sample id Sample description nTPM
Hippocampus
nTPM: 346.4
2621 Female, age 67, right hemisphere 460.2
2148 Female, age 91, left hemisphere 416.3
1898 Male, age 80, left hemisphere 378.8
1855 Male, age 76, left hemisphere 297.8
2529 Female, age 94, left hemisphere 273.8
1911 Female, age 85, right hemisphere 251.7
Dentate gyrus
nTPM: 370.1
2531 Female, age 67, both hemispheres 516.0
1927 Female, age 91, both hemispheres 505.2
2530 Female, age 94, left hemisphere 340.5
2528 Male, age 74, both hemispheres 326.4
2010 Male, age 76, both hemispheres 298.2
2246 Female, age 85, both hemispheres 234.3
Entorhinal gyrus
nTPM: 245.7
2613 Female, age 94, left hemisphere 319.2
2686 Male, age 75, right hemisphere 283.1
2764 Male, age 80, right hemisphere 266.5
1787 Male, age 76, left hemisphere 241.9
1938 Female, age 85, left hemisphere 213.0
2117 Female, age 91, right hemisphere 150.6
Hippocampus, CA1
nTPM: 385.9
2749 Male, age 80, left hemisphere 645.1
2527 Male, age 74, both hemispheres 361.3
2045 Male, age 76, both hemispheres 340.7
1873 Female, age 85, both hemispheres 336.0
2082 Female, age 91, right hemisphere 246.5
Hippocampus, CA2
nTPM: 313.3
1963 Male, age 80, left hemisphere 497.3
1892 Male, age 76, both hemispheres 364.8
2437 Female, age 94, left hemisphere 333.7
2113 Female, age 91, right hemisphere 256.6
2249 Male, age 74, both hemispheres 233.8
1940 Female, age 85, left hemisphere 193.7
Hippocampus, CA3
nTPM: 414.4
2861 Female, age 67, both hemispheres 594.2
2620 Female, age 94, left hemisphere 586.6
2137 Male, age 80, left hemisphere 497.7
1867 Male, age 76, both hemispheres 329.2
2436 Male, age 74, both hemispheres 243.0
1891 Female, age 85, both hemispheres 235.4
Parahippocampal cortex
nTPM: 264.5
2245 Female, age 91, both hemispheres 373.9
1850 Male, age 80, both hemispheres 297.4
2622 Female, age 67, right hemisphere 294.5
2693 Female, age 94, both hemispheres 287.5
2250 Female, age 67, right hemisphere 259.7
1990 Female, age 91, right hemisphere 257.2
1933 Female, age 85, both hemispheres 234.2
2018 Male, age 76, both hemispheres 227.7
2692 Male, age 74, both hemispheres 215.5
2532 Female, age 72, left hemisphere 197.3
Perirhinal gyrus
nTPM: 340.1
1847 Female, age 91, left hemisphere 426.6
2521 Female, age 94, right hemisphere 393.2
1794 Male, age 80, right hemisphere 384.5
1841 Female, age 85, right hemisphere 279.7
2848 Male, age 76, right hemisphere 216.7
Subiculum
nTPM: 243.2
1901 Male, age 80, both hemispheres 302.1
2438 Female, age 94, left hemisphere 258.5
2729 Female, age 91, right hemisphere 251.2
2619 Male, age 74, both hemispheres 230.8
1977 Female, age 85, both hemispheres 221.6
2042 Male, age 76, both hemispheres 194.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 160.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 160.8
Samples: 255

Max nTPM: 492.8
Min nTPM: 5.6
Std nTPM: 94.1
Median nTPM: 149.5
GTEX-1JJEA-0011-R1b-SM-F6495 60-69 years, male 492.8
GTEX-117XS-0011-R1b-SM-GJ3PQ 60-69 years, male 467.9
GTEX-11OF3-0011-R1b-SM-H65ZT 60-69 years, male 381.7
GTEX-13VXU-0011-R1a-SM-GINAT 50-59 years, male 377.9
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 364.5
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 358.0
GTEX-1JJ6O-0011-R1b-SM-F2I2M 60-69 years, male 357.5
GTEX-11DXY-0011-R1b-SM-GI4VQ 60-69 years, male 344.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 341.0
GTEX-15DYW-0011-R1a-SM-H6Q6Q 60-69 years, female 330.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 330.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 142.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 142.7
FF:10169-103B7 60 years, female 190.0
FF:10153-102I9 76 years, female 95.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 180.4
Pig sample Sample description nTPM
Subiculum
nTPM: 131.1
Samples: 4

Max nTPM: 172.1
Min nTPM: 98.1
Sample A Female 172.1
Sample B Female 108.6
Sample C Male 145.5
Sample D Male 98.1
Dorsal hippocampus
nTPM: 180.5
Samples: 4

Max nTPM: 227.6
Min nTPM: 140.6
Sample A Female 227.6
Sample B Female 188.2
Sample C Male 165.4
Sample D Male 140.6
Entorhinal cortex
nTPM: 164.9
Samples: 4

Max nTPM: 175.0
Min nTPM: 153.8
Sample A Female 175.0
Sample B Female 166.1
Sample C Male 164.8
Sample D Male 153.8
Ventral hippocampus
nTPM: 164.3
Samples: 4

Max nTPM: 194.9
Min nTPM: 117.9
Sample A Female 161.9
Sample B Female 117.9
Sample C Male 182.3
Sample D Male 194.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 315.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 188.9
Samples: 4

Max nTPM: 212.9
Min nTPM: 158.3
Sample A Male 212.9
Sample B Male 176.1
Sample C Female 208.4
Sample D Female 158.3
Hippocampal formation
nTPM: 315.3
Samples: 4

Max nTPM: 361.3
Min nTPM: 285.9
Sample A Male 285.9
Sample B Male 317.2
Sample C Female 361.3
Sample D Female 296.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 8.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.3
1754 Antisense, RP_040526_01_F09, Mouse strain C57BL/6J (56 days, male) 8.3
1755 Antisense, RP_040526_01_F09, Mouse strain C57BL/6J (56 days, male) 3.3

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