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  • TISSUE

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  • KCNAB2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:41.2 nTPM
HPA Brain:139.1 nTPM
GTEx:41.2 nTPM
Pig:37.1 nTPM
Mouse:76.1 nTPM
Allen mouse:2.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

139.1
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 50.1
1961 Female, age 42, unknown 53.9
2226 Male, age 75, left hemisphere 46.4
Dorsomedial nucleus
nTPM: 76.4
1989 Male, age 62, unknown 131.7
2017 Female, age 42, unknown 57.2
2041 Female, age 72, unknown 40.3
Lateral hypothalamic area
nTPM: 110.0
1791 Male, age 80, right hemisphere 128.6
2228 Male, age 66, unknown 121.3
2271 Male, age 75, both hemispheres 112.5
2412 Male, age 62, unknown 77.8
Mammillary body
nTPM: 139.1
1923 Female, age 72, unknown 218.7
2413 Male, age 66, unknown 152.4
1948 Female, age 72, unknown 128.4
1834 Female, age 42, unknown 119.1
1945 Male, age 80, right hemisphere 77.1
Paraventricular nucleus
nTPM: 50.1
2700 Male, age 62, unknown 50.1
Preoptic area
nTPM: 75.4
1907 Male, age 80, right hemisphere 89.7
1861 Female, age 42, unknown 80.6
2414 Female, age 72, unknown 56.0
Supraoptic nucleus
nTPM: 61.1
2835 Female, age 72, unknown 93.0
1894 Female, age 72, unknown 55.0
2043 Male, age 62, unknown 35.1
Ventromedial nucleus
nTPM: 67.4
1982 Female, age 72, unknown 83.0
1822 Female, age 42, unknown 51.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

41.2
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 41.2
Samples: 257

Max nTPM: 225.8
Min nTPM: 8.0
Std nTPM: 25.7
Median nTPM: 36.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 225.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 181.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 145.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 138.4
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 131.7
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 128.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 124.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 115.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 111.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 106.3
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 94.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 81.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 75.0
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 72.9
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 71.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 71.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 70.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 66.3
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 66.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 64.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 64.0
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 63.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 62.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 62.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 61.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 60.6
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 60.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 59.6
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 59.0
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 58.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 57.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 57.7
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 57.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 57.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 56.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 56.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 56.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 56.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 55.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 55.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 55.1
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 55.0
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 54.8
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 54.7
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 54.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 53.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 53.6
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 53.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 53.1
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 52.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 52.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 52.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 52.5
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 52.3
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 51.8
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 51.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 51.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 51.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 50.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 50.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 50.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 50.4
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 50.2
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 50.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 49.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 49.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 48.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 48.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 48.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 47.7
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 47.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 47.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 46.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 46.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 46.0
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 45.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 45.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 45.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 45.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 44.3
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 44.1
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 43.8
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 43.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 43.5
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 43.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 43.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 43.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 42.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 42.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 42.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 42.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 42.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 42.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 42.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 42.1
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 41.4
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 41.4
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 41.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 41.0
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 40.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 40.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 40.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 40.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 39.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 39.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 39.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 39.5
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 39.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 39.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 38.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 38.8
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 38.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 38.4
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 38.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 38.2
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 38.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 38.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 38.0
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 38.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 37.9
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 37.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 37.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 37.3
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 37.2
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 36.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 36.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 36.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 36.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 36.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 36.4
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 36.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 36.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 36.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 36.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 36.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 35.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 35.7
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 35.6
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 35.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 34.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 34.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 34.6
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 34.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 34.5
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 34.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 33.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 33.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 33.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 33.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 33.3
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 33.1
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 33.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 33.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 33.1
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 32.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 32.7
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 32.7
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 32.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 32.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 32.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 32.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 32.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 32.0
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 32.0
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 32.0
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 31.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 31.9
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 31.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 31.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 30.9
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 30.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 30.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 30.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 29.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 29.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 29.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 29.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 29.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 28.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 28.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 28.1
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 27.9
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 27.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 27.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 27.1
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 27.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 27.0
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 27.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 26.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 26.6
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 26.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 26.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 26.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 26.1
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 25.8
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 25.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 25.6
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 25.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 25.5
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 25.2
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 25.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 25.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 24.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 24.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 24.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 24.5
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 24.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 24.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 23.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 23.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 23.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 22.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 22.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 22.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 22.4
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 22.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 22.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 22.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 21.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 21.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 21.4
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 21.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 20.6
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 20.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 20.4
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 20.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 20.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 20.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 20.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 19.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 19.0
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 19.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 18.5
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 18.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 18.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 18.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 17.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 17.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 17.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 16.8
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 16.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 15.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 15.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 15.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 15.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 14.9
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 14.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 14.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 14.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 12.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 12.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 12.2
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 11.9
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 11.8
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 11.3
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 10.4
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 8.0
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

37.1
Pig sample Sample description nTPM
Hypothalamus
nTPM: 37.2
Samples: 4

Max nTPM: 45.6
Min nTPM: 26.1
Sample A Female 45.6
Sample B Female 41.9
Sample C Male 35.0
Sample D Male 26.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

76.1
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 76.1
Samples: 4

Max nTPM: 79.9
Min nTPM: 69.6
Sample A Male 77.8
Sample B Male 77.1
Sample C Female 69.6
Sample D Female 79.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 2.5
1754 Antisense, RP_040526_01_F09, Mouse strain C57BL/6J (56 days, male) 2.5
1755 Antisense, RP_040526_01_F09, Mouse strain C57BL/6J (56 days, male) 0.4

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