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  • PABPC1
IMMUNE CELL NK-CELLS Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cells
Nk-cells
Immune cell methods
NK-CELLS - Expression summary
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA:307.9 nTPM
Monaco:514.3 nTPM
Schmiedel:739.0 TPM

NK-CELLS - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

307.9
HPA sample nTPM
NK-cell
nTPM: 307.9
Samples: 6

Max nTPM: 359.9
Min nTPM: 247.9
P10809_1013 317.3
P10809_1033 278.8
P10809_1052 247.9
P10809_1071 359.9
P10809_1093 314.4
P10809_1103 329.3

NK-CELLS - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

514.3
Monaco sample nTPM
NK-cell
nTPM: 514.3
Samples: 4

Max nTPM: 607.0
Min nTPM: 402.8
RHH5316_R3683 402.8
RHH5224_R3596 607.0
RHH5253_R3625 489.0
RHH5282_R3654 558.5

NK-CELLS - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max subtype TPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

739.0
Schmiedel sample id TPM
NK-cell
TPM: 738.9
Samples: 90

Max TPM: 1019.3
Min TPM: 558.1
NK_1 1019.3
NK_2 956.3
NK_3 954.4
NK_4 927.9
NK_5 922.1
NK_6 902.8
NK_7 875.5
NK_8 866.6
NK_9 863.7
NK_10 863.5
NK_11 862.0
NK_12 861.7
NK_13 854.6
NK_14 834.7
NK_15 834.3
NK_16 831.8
NK_17 830.0
NK_18 817.4
NK_19 815.6
NK_20 807.6
NK_21 804.5
NK_22 804.4
NK_23 795.4
NK_24 788.8
NK_25 788.4
NK_26 786.1
NK_27 783.5
NK_28 783.1
NK_29 781.6
NK_30 780.5
NK_31 780.0
NK_32 773.9
NK_33 772.6
NK_34 771.8
NK_35 765.5
NK_36 762.7
NK_37 760.0
NK_38 750.6
NK_39 747.7
NK_40 747.0
NK_41 744.7
NK_42 739.2
NK_43 738.7
NK_44 734.3
NK_45 732.4
NK_46 729.5
NK_47 729.1
NK_48 728.5
NK_49 728.1
NK_50 725.3
NK_51 725.1
NK_52 720.3
NK_53 711.4
NK_54 707.6
NK_55 706.4
NK_56 705.0
NK_57 700.5
NK_58 697.9
NK_59 696.8
NK_60 690.8
NK_61 690.0
NK_62 684.1
NK_63 678.8
NK_64 677.5
NK_65 670.3
NK_66 670.0
NK_67 669.6
NK_68 668.0
NK_69 667.0
NK_70 667.0
NK_71 666.2
NK_72 656.3
NK_73 653.6
NK_74 653.4
NK_75 652.7
NK_76 647.3
NK_77 646.3
NK_78 640.0
NK_79 634.5
NK_80 623.0
NK_81 620.7
NK_82 614.7
NK_83 604.4
NK_84 586.8
NK_85 584.5
NK_86 583.6
NK_87 575.6
NK_88 570.4
NK_89 569.5
NK_90 558.1
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