HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:548.7 nTPM
HPA Brain:599.2 nTPM
GTEx:548.7 nTPM
FANTOM5:693.5 Scaled Tags Per Million
Pig:371.8 nTPM
Mouse:841.7 nTPM
Allen mouse:5.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody CAB018614Antibody CAB069394Antibody CAB080034
Glial cells HighLowHigh
Neuronal cells LowLowMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 599.2
Sample id Sample description nTPM
Hippocampus
nTPM: 507.4
1898 Male, age 80, left hemisphere 706.4
1855 Male, age 76, left hemisphere 517.0
2529 Female, age 94, left hemisphere 494.4
1911 Female, age 85, right hemisphere 451.3
2148 Female, age 91, left hemisphere 442.8
2621 Female, age 67, right hemisphere 432.5
Dentate gyrus
nTPM: 468.1
2010 Male, age 76, both hemispheres 623.8
2528 Male, age 74, both hemispheres 573.2
1927 Female, age 91, both hemispheres 462.7
2246 Female, age 85, both hemispheres 453.6
2530 Female, age 94, left hemisphere 382.5
2531 Female, age 67, both hemispheres 312.7
Entorhinal gyrus
nTPM: 407.3
2764 Male, age 80, right hemisphere 498.3
2117 Female, age 91, right hemisphere 480.3
1938 Female, age 85, left hemisphere 477.4
1787 Male, age 76, left hemisphere 377.1
2686 Male, age 75, right hemisphere 322.8
2613 Female, age 94, left hemisphere 288.1
Hippocampus, CA1
nTPM: 599.2
2749 Male, age 80, left hemisphere 785.0
2527 Male, age 74, both hemispheres 634.3
1873 Female, age 85, both hemispheres 542.7
2082 Female, age 91, right hemisphere 518.2
2045 Male, age 76, both hemispheres 515.5
Hippocampus, CA2
nTPM: 523.6
2249 Male, age 74, both hemispheres 738.6
1963 Male, age 80, left hemisphere 525.7
1940 Female, age 85, left hemisphere 504.9
1892 Male, age 76, both hemispheres 503.7
2113 Female, age 91, right hemisphere 492.1
2437 Female, age 94, left hemisphere 376.5
Hippocampus, CA3
nTPM: 495.6
2436 Male, age 74, both hemispheres 640.7
2137 Male, age 80, left hemisphere 639.2
1867 Male, age 76, both hemispheres 523.8
1891 Female, age 85, both hemispheres 452.2
2620 Female, age 94, left hemisphere 378.3
2861 Female, age 67, both hemispheres 339.1
Parahippocampal cortex
nTPM: 419.3
2018 Male, age 76, both hemispheres 498.0
2250 Female, age 67, right hemisphere 491.9
1933 Female, age 85, both hemispheres 476.4
1850 Male, age 80, both hemispheres 469.2
2245 Female, age 91, both hemispheres 439.5
1990 Female, age 91, right hemisphere 409.7
2692 Male, age 74, both hemispheres 370.4
2532 Female, age 72, left hemisphere 354.2
2622 Female, age 67, right hemisphere 344.7
2693 Female, age 94, both hemispheres 339.2
Perirhinal gyrus
nTPM: 463.0
1847 Female, age 91, left hemisphere 576.3
1794 Male, age 80, right hemisphere 505.8
1841 Female, age 85, right hemisphere 454.8
2521 Female, age 94, right hemisphere 436.3
2848 Male, age 76, right hemisphere 342.0
Subiculum
nTPM: 449.1
1901 Male, age 80, both hemispheres 500.8
1977 Female, age 85, both hemispheres 494.9
2729 Female, age 91, right hemisphere 458.8
2619 Male, age 74, both hemispheres 454.1
2042 Male, age 76, both hemispheres 432.1
2438 Female, age 94, left hemisphere 354.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 548.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 548.7
Samples: 255

Max nTPM: 981.8
Min nTPM: 212.8
Std nTPM: 142.5
Median nTPM: 546.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 981.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 916.3
GTEX-12696-0011-R1a-SM-GHWPW 60-69 years, male 902.4
GTEX-1P4AB-0011-R1b-SM-F2TAV 50-59 years, male 878.0
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 853.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 835.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 832.4
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 830.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 823.5
GTEX-1JMQL-0011-R1a-SM-F3K4U 50-59 years, female 809.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 806.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 693.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 693.5
FF:10169-103B7 60 years, female 806.9
FF:10153-102I9 76 years, female 580.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 371.8
Pig sample Sample description nTPM
Subiculum
nTPM: 289.4
Samples: 4

Max nTPM: 362.0
Min nTPM: 251.6
Sample A Female 362.0
Sample B Female 270.1
Sample C Male 274.0
Sample D Male 251.6
Dorsal hippocampus
nTPM: 361.4
Samples: 4

Max nTPM: 473.3
Min nTPM: 282.0
Sample A Female 473.3
Sample B Female 321.3
Sample C Male 368.9
Sample D Male 282.0
Entorhinal cortex
nTPM: 304.9
Samples: 4

Max nTPM: 352.3
Min nTPM: 260.4
Sample A Female 293.4
Sample B Female 352.3
Sample C Male 313.3
Sample D Male 260.4
Ventral hippocampus
nTPM: 371.8
Samples: 4

Max nTPM: 461.5
Min nTPM: 265.0
Sample A Female 398.1
Sample B Female 265.0
Sample C Male 461.5
Sample D Male 362.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 841.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 833.3
Samples: 4

Max nTPM: 981.9
Min nTPM: 746.6
Sample A Male 746.6
Sample B Male 801.0
Sample C Female 803.6
Sample D Female 981.9
Hippocampal formation
nTPM: 841.7
Samples: 4

Max nTPM: 889.4
Min nTPM: 793.8
Sample A Male 821.6
Sample B Male 793.8
Sample C Female 862.1
Sample D Female 889.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 5.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.0
74822850 Antisense, RP_050921_03_C01, Mouse strain C57BL/6J (56 days, male) 5.0

Contact

The Project

The Human Protein Atlas

KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo