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IMMUNE CELL NK-CELLS Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cells
Nk-cells
Immune cell methods
NK-CELLS - Expression summary
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA:6250.3 nTPM
Monaco:18559.5 nTPM
Schmiedel:2945.4 TPM

NK-CELLS - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

6250.3
HPA sample nTPM
NK-cell
nTPM: 6250.3
Samples: 6

Max nTPM: 7819.5
Min nTPM: 5004.0
P10809_1013 6411.7
P10809_1033 7819.5
P10809_1052 5965.6
P10809_1071 5004.0
P10809_1093 5696.7
P10809_1103 6604.5

NK-CELLS - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

18559.5
Monaco sample nTPM
NK-cell
nTPM: 18559.6
Samples: 4

Max nTPM: 22264.9
Min nTPM: 13416.9
RHH5316_R3683 22174.4
RHH5224_R3596 22264.9
RHH5253_R3625 13416.9
RHH5282_R3654 16382.0

NK-CELLS - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max subtype TPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

2945.4
Schmiedel sample id TPM
NK-cell
TPM: 2945.4
Samples: 90

Max TPM: 5325.7
Min TPM: 1483.0
NK_1 5325.7
NK_2 5220.5
NK_3 4731.6
NK_4 4395.2
NK_5 4172.8
NK_6 4160.9
NK_7 4122.7
NK_8 4088.0
NK_9 4062.5
NK_10 4053.5
NK_11 4009.8
NK_12 3987.2
NK_13 3968.7
NK_14 3957.5
NK_15 3837.7
NK_16 3789.7
NK_17 3770.0
NK_18 3665.8
NK_19 3649.1
NK_20 3647.9
NK_21 3608.7
NK_22 3575.7
NK_23 3530.6
NK_24 3480.5
NK_25 3472.6
NK_26 3457.9
NK_27 3449.7
NK_28 3409.7
NK_29 3361.0
NK_30 3309.8
NK_31 3309.0
NK_32 3307.0
NK_33 3281.2
NK_34 3251.8
NK_35 3193.2
NK_36 3094.8
NK_37 3087.3
NK_38 3059.2
NK_39 3052.5
NK_40 2948.7
NK_41 2939.2
NK_42 2923.8
NK_43 2903.1
NK_44 2888.9
NK_45 2866.4
NK_46 2866.0
NK_47 2852.9
NK_48 2844.8
NK_49 2828.3
NK_50 2826.7
NK_51 2814.9
NK_52 2797.1
NK_53 2789.9
NK_54 2743.8
NK_55 2653.6
NK_56 2591.4
NK_57 2490.7
NK_58 2442.9
NK_59 2435.8
NK_60 2408.7
NK_61 2404.4
NK_62 2374.7
NK_63 2362.6
NK_64 2354.2
NK_65 2342.4
NK_66 2312.3
NK_67 2302.9
NK_68 2285.6
NK_69 2283.6
NK_70 2272.3
NK_71 2265.4
NK_72 2201.7
NK_73 2171.0
NK_74 2157.1
NK_75 2089.5
NK_76 2081.4
NK_77 2061.5
NK_78 1988.5
NK_79 1969.3
NK_80 1935.6
NK_81 1931.0
NK_82 1876.3
NK_83 1826.6
NK_84 1797.6
NK_85 1719.0
NK_86 1685.4
NK_87 1644.6
NK_88 1573.2
NK_89 1562.5
NK_90 1483.0
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