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IMMUNE CELL NK-CELLS Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cells
Nk-cells
Immune cell methods
NK-CELLS - Expression summary
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA:26.5 nTPM
Monaco:137.0 nTPM
Schmiedel:92.6 TPM

NK-CELLS - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

26.5
HPA sample nTPM
NK-cell
nTPM: 26.5
Samples: 6

Max nTPM: 47.1
Min nTPM: 15.6
P10809_1013 47.1
P10809_1033 15.6
P10809_1052 16.9
P10809_1071 19.1
P10809_1093 33.4
P10809_1103 27.2

NK-CELLS - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

137.0
Monaco sample nTPM
NK-cell
nTPM: 137.0
Samples: 4

Max nTPM: 198.9
Min nTPM: 37.1
RHH5316_R3683 198.9
RHH5224_R3596 37.1
RHH5253_R3625 172.2
RHH5282_R3654 139.9

NK-CELLS - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max subtype TPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

92.6
Schmiedel sample id TPM
NK-cell
TPM: 92.6
Samples: 90

Max TPM: 177.0
Min TPM: 21.8
NK_1 177.0
NK_2 176.8
NK_3 174.0
NK_4 171.6
NK_5 171.5
NK_6 171.4
NK_7 168.4
NK_8 166.9
NK_9 158.1
NK_10 150.6
NK_11 149.8
NK_12 137.5
NK_13 137.0
NK_14 136.2
NK_15 134.5
NK_16 129.0
NK_17 128.0
NK_18 126.9
NK_19 125.9
NK_20 125.9
NK_21 125.2
NK_22 122.3
NK_23 121.8
NK_24 121.7
NK_25 120.9
NK_26 120.8
NK_27 120.5
NK_28 119.0
NK_29 111.6
NK_30 110.0
NK_31 106.9
NK_32 106.5
NK_33 106.4
NK_34 105.8
NK_35 105.8
NK_36 104.7
NK_37 102.5
NK_38 97.5
NK_39 97.3
NK_40 97.2
NK_41 94.8
NK_42 93.8
NK_43 87.4
NK_44 87.2
NK_45 86.3
NK_46 85.6
NK_47 85.5
NK_48 84.3
NK_49 83.8
NK_50 82.2
NK_51 80.7
NK_52 78.3
NK_53 76.4
NK_54 75.8
NK_55 74.7
NK_56 74.4
NK_57 73.8
NK_58 72.7
NK_59 71.4
NK_60 70.4
NK_61 69.7
NK_62 69.4
NK_63 67.6
NK_64 67.4
NK_65 66.2
NK_66 66.1
NK_67 65.7
NK_68 62.6
NK_69 61.0
NK_70 58.4
NK_71 57.5
NK_72 57.2
NK_73 56.8
NK_74 51.7
NK_75 51.7
NK_76 50.8
NK_77 49.3
NK_78 47.5
NK_79 47.3
NK_80 41.1
NK_81 40.3
NK_82 38.4
NK_83 38.2
NK_84 35.8
NK_85 35.4
NK_86 27.4
NK_87 25.2
NK_88 23.8
NK_89 21.9
NK_90 21.8
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