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  • TISSUE

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  • CLDND1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:312.0 nTPM
HPA Brain:621.6 nTPM
GTEx:312.0 nTPM
Pig:62.9 nTPM
Mouse:108.7 nTPM
Allen mouse:1.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

621.6
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 118.9
2226 Male, age 75, left hemisphere 153.3
1961 Female, age 42, unknown 84.4
Dorsomedial nucleus
nTPM: 227.5
2017 Female, age 42, unknown 351.0
1989 Male, age 62, unknown 199.7
2041 Female, age 72, unknown 131.9
Lateral hypothalamic area
nTPM: 347.1
2271 Male, age 75, both hemispheres 451.4
2228 Male, age 66, unknown 413.0
1791 Male, age 80, right hemisphere 291.0
2412 Male, age 62, unknown 233.2
Mammillary body
nTPM: 621.6
1945 Male, age 80, right hemisphere 787.1
1948 Female, age 72, unknown 675.1
1834 Female, age 42, unknown 663.9
1923 Female, age 72, unknown 519.6
2413 Male, age 66, unknown 462.4
Paraventricular nucleus
nTPM: 497.3
2700 Male, age 62, unknown 497.3
Preoptic area
nTPM: 381.4
2414 Female, age 72, unknown 603.7
1861 Female, age 42, unknown 375.3
1907 Male, age 80, right hemisphere 165.0
Supraoptic nucleus
nTPM: 406.4
2043 Male, age 62, unknown 573.2
1894 Female, age 72, unknown 399.7
2835 Female, age 72, unknown 246.3
Ventromedial nucleus
nTPM: 97.8
1982 Female, age 72, unknown 106.6
1822 Female, age 42, unknown 89.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

312.0
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 312.0
Samples: 257

Max nTPM: 1551.9
Min nTPM: 63.0
Std nTPM: 260.4
Median nTPM: 219.4
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 1551.9
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 1471.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 1290.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 1220.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 1207.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 1166.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 1149.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 1103.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 1016.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 1006.4
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 880.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 858.5
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 842.9
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 838.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 807.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 794.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 768.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 757.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 747.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 740.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 737.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 731.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 727.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 707.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 692.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 689.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 674.2
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 647.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 624.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 620.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 612.3
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 608.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 606.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 567.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 561.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 558.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 553.6
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 548.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 533.0
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 527.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 526.7
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 515.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 492.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 481.2
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 463.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 457.7
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 454.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 453.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 450.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 448.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 438.3
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 435.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 433.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 417.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 413.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 406.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 403.7
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 401.0
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 400.8
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 396.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 389.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 385.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 382.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 380.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 379.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 375.4
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 375.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 372.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 371.9
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 367.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 354.1
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 349.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 346.0
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 344.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 339.3
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 337.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 336.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 333.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 329.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 326.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 323.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 322.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 321.7
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 320.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 314.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 309.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 308.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 308.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 302.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 302.4
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 301.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 294.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 294.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 291.0
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 284.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 282.3
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 282.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 277.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 273.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 272.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 269.9
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 268.5
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 266.3
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 264.6
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 262.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 258.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 257.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 253.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 253.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 251.9
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 251.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 251.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 251.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 243.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 241.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 240.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 239.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 238.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 238.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 237.6
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 235.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 235.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 232.7
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 230.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 226.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 223.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 222.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 221.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 219.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 217.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 215.7
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 215.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 213.6
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 213.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 212.4
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 212.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 210.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 210.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 208.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 205.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 205.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 203.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 202.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 201.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 199.3
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 196.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 195.8
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 194.3
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 192.9
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 192.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 192.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 188.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 187.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 187.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 184.2
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 182.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 180.3
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 177.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 174.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 172.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 172.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 172.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 170.7
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 163.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 162.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 162.5
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 162.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 161.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 161.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 160.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 160.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 159.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 158.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 158.2
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 156.5
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 152.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 151.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 151.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 150.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 150.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 147.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 145.5
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 144.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 143.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 143.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 143.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 140.1
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 139.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 139.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 137.7
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 136.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 136.1
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 135.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 134.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 134.0
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 134.0
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 133.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 132.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 132.4
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 130.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 129.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 129.7
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 129.4
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 124.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 124.8
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 124.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 124.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 123.7
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 123.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 122.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 121.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 120.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 120.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 119.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 117.9
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 117.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 117.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 117.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 116.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 116.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 116.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 116.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 115.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 115.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 114.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 113.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 112.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 112.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 112.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 112.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 112.0
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 111.7
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 111.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 110.9
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 109.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 108.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 107.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 104.2
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 103.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 102.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 101.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 97.6
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 97.5
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 97.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 96.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 96.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 95.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 95.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 94.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 91.2
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 89.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 87.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 87.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 83.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 77.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 74.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 63.0
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

62.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 62.9
Samples: 4

Max nTPM: 73.1
Min nTPM: 50.7
Sample A Female 68.7
Sample B Female 73.1
Sample C Male 59.1
Sample D Male 50.7

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

108.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 108.7
Samples: 4

Max nTPM: 118.1
Min nTPM: 96.5
Sample A Male 96.5
Sample B Male 107.7
Sample C Female 118.1
Sample D Female 112.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.3
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.3
71656904 Antisense, RP_050927_04_E05, Mouse strain C57BL/6J (56 days, male) 1.3

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