HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:610.2 nTPM
HPA Brain:711.8 nTPM
GTEx:610.2 nTPM
FANTOM5:1564.0 Scaled Tags Per Million
Pig:981.2 nTPM
Mouse:939.3 nTPM
Allen mouse:19.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody CAB002058
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 711.8
Sample id Sample description nTPM
Hippocampus
nTPM: 627.3
1898 Male, age 80, left hemisphere 870.8
2529 Female, age 94, left hemisphere 680.6
1855 Male, age 76, left hemisphere 639.3
2621 Female, age 67, right hemisphere 601.8
1911 Female, age 85, right hemisphere 516.8
2148 Female, age 91, left hemisphere 454.5
Dentate gyrus
nTPM: 611.6
2010 Male, age 76, both hemispheres 882.5
1927 Female, age 91, both hemispheres 666.3
2530 Female, age 94, left hemisphere 648.6
2528 Male, age 74, both hemispheres 564.4
2246 Female, age 85, both hemispheres 550.8
2531 Female, age 67, both hemispheres 357.0
Entorhinal gyrus
nTPM: 503.2
1938 Female, age 85, left hemisphere 611.8
2764 Male, age 80, right hemisphere 550.4
1787 Male, age 76, left hemisphere 548.6
2117 Female, age 91, right hemisphere 521.0
2686 Male, age 75, right hemisphere 452.8
2613 Female, age 94, left hemisphere 334.5
Hippocampus, CA1
nTPM: 711.8
2749 Male, age 80, left hemisphere 1038.5
1873 Female, age 85, both hemispheres 828.9
2527 Male, age 74, both hemispheres 610.9
2045 Male, age 76, both hemispheres 591.5
2082 Female, age 91, right hemisphere 489.2
Hippocampus, CA2
nTPM: 680.5
1892 Male, age 76, both hemispheres 960.8
1963 Male, age 80, left hemisphere 782.0
2249 Male, age 74, both hemispheres 775.4
2437 Female, age 94, left hemisphere 550.0
1940 Female, age 85, left hemisphere 527.0
2113 Female, age 91, right hemisphere 487.7
Hippocampus, CA3
nTPM: 585.6
2137 Male, age 80, left hemisphere 815.4
1867 Male, age 76, both hemispheres 769.2
2436 Male, age 74, both hemispheres 679.2
1891 Female, age 85, both hemispheres 521.5
2620 Female, age 94, left hemisphere 384.2
2861 Female, age 67, both hemispheres 343.7
Parahippocampal cortex
nTPM: 563.5
2018 Male, age 76, both hemispheres 707.8
1850 Male, age 80, both hemispheres 685.3
1933 Female, age 85, both hemispheres 623.9
2250 Female, age 67, right hemisphere 598.9
1990 Female, age 91, right hemisphere 590.4
2532 Female, age 72, left hemisphere 580.9
2245 Female, age 91, both hemispheres 574.1
2692 Male, age 74, both hemispheres 496.8
2693 Female, age 94, both hemispheres 416.1
2622 Female, age 67, right hemisphere 360.2
Perirhinal gyrus
nTPM: 586.6
1847 Female, age 91, left hemisphere 726.8
1841 Female, age 85, right hemisphere 622.9
1794 Male, age 80, right hemisphere 573.4
2848 Male, age 76, right hemisphere 510.6
2521 Female, age 94, right hemisphere 499.5
Subiculum
nTPM: 587.2
2042 Male, age 76, both hemispheres 739.0
1901 Male, age 80, both hemispheres 683.3
2438 Female, age 94, left hemisphere 594.9
1977 Female, age 85, both hemispheres 582.4
2619 Male, age 74, both hemispheres 506.6
2729 Female, age 91, right hemisphere 416.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 610.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 610.2
Samples: 255

Max nTPM: 4292.1
Min nTPM: 233.5
Std nTPM: 393.9
Median nTPM: 513.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 4292.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 2541.5
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 2222.1
GTEX-1JMQL-0011-R1a-SM-F3K4U 50-59 years, female 2097.2
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 1969.8
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 1800.2
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 1754.3
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 1424.1
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 1408.0
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 1399.1
GTEX-1PIIG-0011-R1a-SM-F649P 30-39 years, male 1363.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1564.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1564.0
FF:10169-103B7 60 years, female 1819.5
FF:10153-102I9 76 years, female 1308.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 981.2
Pig sample Sample description nTPM
Subiculum
nTPM: 805.2
Samples: 4

Max nTPM: 990.3
Min nTPM: 702.4
Sample A Female 990.3
Sample B Female 767.0
Sample C Male 702.4
Sample D Male 761.2
Dorsal hippocampus
nTPM: 981.2
Samples: 4

Max nTPM: 1287.5
Min nTPM: 658.6
Sample A Female 1287.5
Sample B Female 894.7
Sample C Male 1084.0
Sample D Male 658.6
Entorhinal cortex
nTPM: 750.8
Samples: 4

Max nTPM: 859.9
Min nTPM: 671.9
Sample A Female 741.6
Sample B Female 859.9
Sample C Male 729.6
Sample D Male 671.9
Ventral hippocampus
nTPM: 837.8
Samples: 4

Max nTPM: 1030.6
Min nTPM: 625.1
Sample A Female 1030.6
Sample B Female 625.1
Sample C Male 813.4
Sample D Male 882.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 939.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 939.4
Samples: 4

Max nTPM: 1063.5
Min nTPM: 846.6
Sample A Male 846.6
Sample B Male 941.9
Sample C Female 905.5
Sample D Female 1063.5
Hippocampal formation
nTPM: 893.2
Samples: 4

Max nTPM: 949.3
Min nTPM: 832.9
Sample A Male 913.8
Sample B Male 876.8
Sample C Female 949.3
Sample D Female 832.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 19.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.3
69012681 Antisense, RP_050309_01_C05, Mouse strain C57BL/6J (56 days, male) 19.3

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