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  • TISSUE

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  • HSP90AA1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:635.3 nTPM
HPA Brain:978.7 nTPM
GTEx:635.3 nTPM
Pig:932.0 nTPM
Mouse:1070.8 nTPM
Allen mouse:18.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

978.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 633.9
2226 Male, age 75, left hemisphere 775.3
1961 Female, age 42, unknown 492.6
Dorsomedial nucleus
nTPM: 661.9
1989 Male, age 62, unknown 751.4
2041 Female, age 72, unknown 739.1
2017 Female, age 42, unknown 495.1
Lateral hypothalamic area
nTPM: 978.7
2228 Male, age 66, unknown 1196.8
2271 Male, age 75, both hemispheres 1047.5
1791 Male, age 80, right hemisphere 995.7
2412 Male, age 62, unknown 674.7
Mammillary body
nTPM: 810.8
1923 Female, age 72, unknown 1064.6
2413 Male, age 66, unknown 827.6
1948 Female, age 72, unknown 801.8
1945 Male, age 80, right hemisphere 749.3
1834 Female, age 42, unknown 610.9
Paraventricular nucleus
nTPM: 637.8
2700 Male, age 62, unknown 637.8
Preoptic area
nTPM: 708.6
2414 Female, age 72, unknown 754.6
1907 Male, age 80, right hemisphere 715.6
1861 Female, age 42, unknown 655.7
Supraoptic nucleus
nTPM: 742.6
1894 Female, age 72, unknown 871.9
2835 Female, age 72, unknown 682.2
2043 Male, age 62, unknown 673.8
Ventromedial nucleus
nTPM: 529.0
1982 Female, age 72, unknown 539.5
1822 Female, age 42, unknown 518.6

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

635.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 635.3
Samples: 257

Max nTPM: 2488.5
Min nTPM: 220.1
Std nTPM: 293.1
Median nTPM: 566.9
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 2488.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 2178.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 1797.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 1716.9
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 1695.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 1657.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 1623.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 1529.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 1389.5
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 1336.1
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 1265.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 1159.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 1157.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 1121.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 1088.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 1081.5
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 1079.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 1056.1
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 1012.0
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 996.8
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 979.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 955.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 952.8
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 950.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 915.8
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 908.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 904.7
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 896.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 890.5
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 887.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 883.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 881.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 873.8
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 868.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 867.7
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 860.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 855.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 835.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 827.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 825.7
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 825.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 806.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 797.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 795.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 794.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 794.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 778.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 760.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 745.9
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 744.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 743.5
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 741.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 738.7
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 735.9
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 735.8
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 734.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 732.9
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 728.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 717.4
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 715.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 714.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 713.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 712.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 705.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 703.9
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 702.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 702.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 700.3
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 695.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 693.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 687.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 684.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 683.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 679.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 677.4
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 676.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 664.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 661.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 655.2
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 645.8
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 644.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 636.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 636.0
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 635.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 634.3
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 633.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 631.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 628.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 622.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 622.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 618.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 618.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 615.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 615.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 612.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 612.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 609.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 607.9
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 607.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 606.0
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 600.6
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 599.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 599.1
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 598.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 594.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 594.1
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 590.3
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 590.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 589.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 584.9
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 584.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 584.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 584.4
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 583.8
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 580.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 579.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 577.3
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 576.1
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 575.2
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 574.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 574.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 574.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 572.3
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 571.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 571.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 570.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 569.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 568.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 566.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 566.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 566.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 561.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 559.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 559.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 559.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 558.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 557.1
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 556.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 552.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 546.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 545.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 545.5
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 545.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 542.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 541.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 541.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 541.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 540.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 538.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 537.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 537.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 537.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 536.1
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 534.4
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 533.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 532.2
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 530.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 529.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 528.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 525.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 524.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 522.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 521.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 521.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 520.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 516.0
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 511.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 509.6
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 509.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 508.3
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 507.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 504.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 500.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 498.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 493.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 492.3
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 491.3
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 490.8
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 488.8
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 485.7
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 484.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 483.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 483.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 480.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 479.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 476.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 474.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 474.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 473.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 471.9
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 470.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 470.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 470.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 467.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 464.9
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 463.6
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 461.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 460.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 460.8
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 457.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 455.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 455.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 454.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 453.4
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 452.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 450.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 449.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 448.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 440.4
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 440.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 438.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 436.4
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 436.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 436.1
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 433.9
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 433.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 432.9
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 430.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 429.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 428.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 427.0
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 419.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 419.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 418.9
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 418.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 417.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 406.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 398.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 397.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 396.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 391.6
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 391.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 389.6
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 387.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 385.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 384.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 381.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 379.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 372.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 372.8
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 372.7
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 372.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 371.6
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 370.1
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 367.1
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 366.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 352.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 340.5
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 337.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 329.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 323.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 285.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 285.2
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 284.7
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 280.3
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 268.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 220.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

932.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 932.0
Samples: 4

Max nTPM: 1134.9
Min nTPM: 759.7
Sample A Female 1134.9
Sample B Female 958.7
Sample C Male 874.8
Sample D Male 759.7

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1070.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 1070.8
Samples: 4

Max nTPM: 1151.3
Min nTPM: 1011.2
Sample A Male 1011.2
Sample B Male 1094.7
Sample C Female 1151.3
Sample D Female 1025.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

18.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 18.2
69012681 Antisense, RP_050309_01_C05, Mouse strain C57BL/6J (56 days, male) 18.2

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