We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
NFE2L1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • NFE2L1
BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Brain methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:107.1 nTPM
HPA Brain:250.6 nTPM
GTEx:107.1 nTPM
FANTOM5:333.5 Scaled Tags Per Million
Pig:97.6 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

250.6
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 250.6
2565 Male, age 75, midline 348.9
2816 Male, age 47, midline 241.0
2048 Male, age 55, midline 225.3
2194 Female, age 79, both hemispheres 222.0
1981 Female, age 72, midline 215.9
Cervical spinal cord, dorsal horn
nTPM: 218.2
2296 Male, age 66, both hemispheres 281.6
2069 Male, age 47, both hemispheres 224.1
2173 Female, age 72, unknown 221.5
1877 Male, age 55, unknown 207.0
2721 Male, age 90, both hemispheres 202.6
2297 Male, age 75, both hemispheres 172.5
Cervical spinal cord, ventral horn
nTPM: 249.0
2098 Female, age 72, unknown 284.1
2809 Male, age 90, both hemispheres 279.0
2480 Male, age 75, both hemispheres 271.8
2295 Male, age 66, both hemispheres 236.1
2820 Female, age 79, both hemispheres 224.2
2068 Male, age 55, unknown 199.0

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

107.1
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 107.1
Samples: 204

Max nTPM: 250.3
Min nTPM: 61.1
Std nTPM: 25.6
Median nTPM: 102.5
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 250.3
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 243.1
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 185.7
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 183.6
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 178.3
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 170.5
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 169.4
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 155.4
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 150.4
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 149.2
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 147.5
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 143.2
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 139.6
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 139.0
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 137.6
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 136.7
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 136.2
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 135.6
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 133.0
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 133.0
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 132.7
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 129.4
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 128.7
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 128.5
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 128.3
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 128.1
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 128.0
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 128.0
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 127.9
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 127.4
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 127.0
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 126.5
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 126.3
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 125.7
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 125.2
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 124.4
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 123.6
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 123.5
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 121.9
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 121.8
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 121.8
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 121.7
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 121.5
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 121.3
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 121.0
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 121.0
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 119.4
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 119.2
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 118.3
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 118.2
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 118.1
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 118.1
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 118.0
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 118.0
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 118.0
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 117.9
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 117.6
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 117.6
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 117.4
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 117.3
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 117.2
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 116.3
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 115.9
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 115.3
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 114.5
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 114.3
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 113.2
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 113.2
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 113.1
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 112.9
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 112.5
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 111.6
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 111.5
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 111.5
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 111.4
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 111.4
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 111.3
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 110.8
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 110.8
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 110.7
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 110.5
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 110.4
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 110.4
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 110.3
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 110.2
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 109.7
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 108.7
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 108.4
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 108.1
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 108.0
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 107.8
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 107.3
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 107.3
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 107.0
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 106.7
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 106.5
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 105.0
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 104.5
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 104.1
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 103.7
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 102.7
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 102.6
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 102.5
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 102.3
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 102.2
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 102.2
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 101.9
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 101.9
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 101.6
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 101.1
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 101.0
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 101.0
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 100.0
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 99.9
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 99.6
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 99.2
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 99.0
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 98.6
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 98.5
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 98.3
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 98.3
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 98.2
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 98.1
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 98.0
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 97.9
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 97.8
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 97.8
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 97.3
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 97.1
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 96.6
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 96.1
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 96.1
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 96.1
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 96.1
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 95.3
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 95.1
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 95.0
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 94.9
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 94.7
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 94.6
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 94.4
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 93.6
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 93.1
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 92.9
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 92.9
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 92.8
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 92.7
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 92.6
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 92.5
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 92.2
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 91.5
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 91.2
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 90.9
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 90.5
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 90.4
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 90.1
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 89.8
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 89.8
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 89.4
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 88.9
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 88.8
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 88.8
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 88.5
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 88.0
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 87.7
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 87.7
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 87.4
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 86.8
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 86.5
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 86.3
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 86.1
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 85.5
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 84.9
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 84.8
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 84.0
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 83.9
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 83.7
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 82.5
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 82.3
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 82.1
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 81.2
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 81.0
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 80.4
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 80.0
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 80.0
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 80.0
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 79.9
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 79.7
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 79.2
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 79.0
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 78.4
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 77.9
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 77.6
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 76.8
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 75.3
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 73.6
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 72.3
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 71.1
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 71.1
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 70.6
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 67.2
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 64.6
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 63.8
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 61.1
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

333.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 333.5
FF:10181-103D1 60 years, female 399.4
FF:10159-103A6 76 years, female 267.6

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

97.6
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 94.1
Samples: 4

Max nTPM: 104.6
Min nTPM: 78.1
Sample A Female 97.1
Sample B Female 78.1
Sample C Male 104.6
Sample D Male 96.6
Ventral spinal cord
nTPM: 97.7
Samples: 4

Max nTPM: 107.5
Min nTPM: 88.9
Sample A Female 101.1
Sample B Female 88.9
Sample C Male 107.5
Sample D Male 93.1

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo