A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
31.0
nTPM
Monaco:
113.2
nTPM
Schmiedel:
135.1
TPM
NK-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
31.0
HPA sample
nTPM
NK-cell nTPM: 31.0
Samples: 6
Max nTPM: 55.7
Min nTPM: 22.2
P10809_1013
28.7
P10809_1033
26.3
P10809_1052
22.2
P10809_1071
26.2
P10809_1093
55.7
P10809_1103
26.6
NK-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
113.2
Monaco sample
nTPM
NK-cell nTPM: 113.2
Samples: 4
Max nTPM: 135.7
Min nTPM: 98.1
RHH5316_R3683
106.0
RHH5224_R3596
98.1
RHH5253_R3625
135.7
RHH5282_R3654
113.1
NK-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
135.1
Schmiedel sample id
TPM
NK-cell TPM: 135.1
Samples: 90
Max TPM: 180.9
Min TPM: 97.5
NK_1
180.9
NK_2
175.0
NK_3
167.5
NK_4
165.6
NK_5
165.4
NK_6
161.7
NK_7
159.8
NK_8
157.7
NK_9
157.3
NK_10
156.9
NK_11
154.0
NK_12
152.8
NK_13
151.2
NK_14
151.1
NK_15
151.0
NK_16
150.9
NK_17
150.1
NK_18
149.3
NK_19
148.8
NK_20
147.9
NK_21
147.8
NK_22
146.8
NK_23
146.5
NK_24
146.0
NK_25
144.3
NK_26
143.7
NK_27
143.5
NK_28
142.8
NK_29
141.8
NK_30
141.3
NK_31
141.2
NK_32
140.9
NK_33
140.9
NK_34
140.6
NK_35
139.7
NK_36
139.4
NK_37
139.0
NK_38
137.6
NK_39
136.6
NK_40
136.3
NK_41
136.3
NK_42
135.3
NK_43
135.2
NK_44
135.1
NK_45
134.5
NK_46
133.9
NK_47
132.7
NK_48
132.2
NK_49
132.2
NK_50
131.5
NK_51
131.4
NK_52
131.1
NK_53
130.8
NK_54
130.3
NK_55
130.2
NK_56
129.8
NK_57
129.6
NK_58
128.2
NK_59
126.7
NK_60
126.1
NK_61
126.1
NK_62
125.7
NK_63
125.6
NK_64
125.3
NK_65
125.2
NK_66
124.3
NK_67
124.2
NK_68
122.8
NK_69
121.5
NK_70
121.4
NK_71
120.5
NK_72
119.8
NK_73
119.8
NK_74
119.5
NK_75
119.4
NK_76
118.7
NK_77
118.7
NK_78
117.2
NK_79
117.1
NK_80
117.0
NK_81
115.8
NK_82
115.0
NK_83
114.7
NK_84
114.2
NK_85
111.7
NK_86
111.1
NK_87
109.6
NK_88
109.2
NK_89
104.4
NK_90
97.5
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.