A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
30.2
nTPM
Monaco:
125.5
nTPM
Schmiedel:
113.9
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
30.2
HPA sample
nTPM
Classical monocyte nTPM: 25.4
Samples: 6
Max nTPM: 42.0
Min nTPM: 14.0
P10809_1003
32.5
P10809_1020
26.7
P10809_1039
42.0
P10809_1058
14.0
P10809_1080
18.6
P10809_1107
18.6
Intermediate monocyte nTPM: 30.2
Samples: 6
Max nTPM: 38.3
Min nTPM: 20.2
P10809_1004
36.7
P10809_1023
38.3
P10809_1042
26.7
P10809_1061
25.7
P10809_1081
20.2
P10809_1108
33.5
Non-classical monocyte nTPM: 20.0
Samples: 5
Max nTPM: 41.6
Min nTPM: 0.2
P10809_1005
41.6
P10809_1053
21.0
P10809_1072
0.2
P10809_1082
14.1
P10809_1109
23.2
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
125.5
Monaco sample
nTPM
Classical monocyte nTPM: 103.8
Samples: 4
Max nTPM: 125.3
Min nTPM: 87.1
RHH5313_R3680
87.1
RHH5221_R3593
125.3
RHH5250_R3622
96.3
RHH5279_R3651
106.4
Intermediate monocyte nTPM: 125.5
Samples: 4
Max nTPM: 185.1
Min nTPM: 94.8
RHH5314_R3681
94.8
RHH5222_R3594
185.1
RHH5251_R3623
105.3
RHH5280_R3652
116.7
Non-classical monocyte nTPM: 113.3
Samples: 4
Max nTPM: 147.4
Min nTPM: 83.0
RHH5315_R3682
106.7
RHH5223_R3595
147.4
RHH5252_R3624
116.1
RHH5281_R3653
83.0
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
113.9
Schmiedel sample id
TPM
Classical monocyte TPM: 101.9
Samples: 91
Max TPM: 131.9
Min TPM: 67.6
MONOCYTES_1
131.9
MONOCYTES_2
127.3
MONOCYTES_3
125.8
MONOCYTES_4
124.3
MONOCYTES_5
121.7
MONOCYTES_6
120.2
MONOCYTES_7
120.0
MONOCYTES_8
119.6
MONOCYTES_9
119.5
MONOCYTES_10
119.3
MONOCYTES_11
118.3
MONOCYTES_12
117.1
MONOCYTES_13
116.8
MONOCYTES_14
116.3
MONOCYTES_15
115.3
MONOCYTES_16
115.2
MONOCYTES_17
113.9
MONOCYTES_18
113.5
MONOCYTES_19
113.3
MONOCYTES_20
112.3
MONOCYTES_21
112.1
MONOCYTES_22
110.8
MONOCYTES_23
110.7
MONOCYTES_24
110.5
MONOCYTES_25
109.2
MONOCYTES_26
108.9
MONOCYTES_27
108.8
MONOCYTES_28
108.7
MONOCYTES_29
108.7
MONOCYTES_30
108.4
MONOCYTES_31
108.3
MONOCYTES_32
107.1
MONOCYTES_33
107.0
MONOCYTES_34
106.7
MONOCYTES_35
104.6
MONOCYTES_36
104.5
MONOCYTES_37
103.8
MONOCYTES_38
103.5
MONOCYTES_39
102.6
MONOCYTES_40
102.6
MONOCYTES_41
102.5
MONOCYTES_42
102.3
MONOCYTES_43
101.9
MONOCYTES_44
101.8
MONOCYTES_45
101.4
MONOCYTES_46
101.3
MONOCYTES_47
101.2
MONOCYTES_48
100.9
MONOCYTES_49
100.8
MONOCYTES_50
100.3
MONOCYTES_51
100.2
MONOCYTES_52
100.2
MONOCYTES_53
100.1
MONOCYTES_54
99.6
MONOCYTES_55
99.3
MONOCYTES_56
99.3
MONOCYTES_57
98.5
MONOCYTES_58
98.3
MONOCYTES_59
97.9
MONOCYTES_60
97.3
MONOCYTES_61
96.2
MONOCYTES_62
96.2
MONOCYTES_63
95.1
MONOCYTES_64
94.2
MONOCYTES_65
93.7
MONOCYTES_66
93.4
MONOCYTES_67
93.3
MONOCYTES_68
93.1
MONOCYTES_69
92.9
MONOCYTES_70
92.7
MONOCYTES_71
92.5
MONOCYTES_72
92.4
MONOCYTES_73
92.2
MONOCYTES_74
91.9
MONOCYTES_75
91.3
MONOCYTES_76
90.6
MONOCYTES_77
90.5
MONOCYTES_78
90.4
MONOCYTES_79
89.9
MONOCYTES_80
88.5
MONOCYTES_81
88.4
MONOCYTES_82
85.9
MONOCYTES_83
85.9
MONOCYTES_84
85.7
MONOCYTES_85
85.0
MONOCYTES_86
80.7
MONOCYTES_87
80.3
MONOCYTES_88
78.3
MONOCYTES_89
77.7
MONOCYTES_90
76.6
MONOCYTES_91
67.6
Show allShow less
Non-classical monocyte TPM: 113.9
Samples: 90
Max TPM: 162.9
Min TPM: 81.6
M2_1
162.9
M2_2
155.2
M2_3
144.6
M2_4
143.2
M2_5
139.4
M2_6
137.0
M2_7
134.7
M2_8
134.5
M2_9
133.4
M2_10
132.9
M2_11
131.1
M2_12
130.9
M2_13
128.1
M2_14
127.8
M2_15
127.4
M2_16
126.3
M2_17
126.1
M2_18
126.1
M2_19
126.1
M2_20
125.5
M2_21
125.2
M2_22
124.3
M2_23
123.8
M2_24
123.7
M2_25
122.4
M2_26
122.3
M2_27
121.7
M2_28
121.1
M2_29
120.7
M2_30
119.3
M2_31
119.1
M2_32
118.0
M2_33
117.8
M2_34
117.1
M2_35
117.0
M2_36
115.8
M2_37
115.6
M2_38
115.5
M2_39
115.2
M2_40
114.2
M2_41
114.0
M2_42
114.0
M2_43
113.1
M2_44
112.9
M2_45
112.7
M2_46
112.7
M2_47
111.7
M2_48
111.6
M2_49
111.2
M2_50
111.2
M2_51
111.1
M2_52
110.6
M2_53
110.6
M2_54
110.2
M2_55
109.1
M2_56
108.6
M2_57
108.4
M2_58
108.4
M2_59
108.2
M2_60
108.2
M2_61
107.6
M2_62
107.3
M2_63
106.9
M2_64
106.4
M2_65
105.3
M2_66
105.2
M2_67
104.5
M2_68
103.7
M2_69
102.7
M2_70
102.4
M2_71
101.9
M2_72
101.3
M2_73
100.7
M2_74
100.5
M2_75
99.7
M2_76
99.4
M2_77
98.6
M2_78
98.0
M2_79
97.7
M2_80
97.3
M2_81
96.0
M2_82
95.7
M2_83
95.6
M2_84
95.3
M2_85
93.4
M2_86
91.2
M2_87
85.8
M2_88
85.2
M2_89
84.6
M2_90
81.6
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Human Protein Atlas project is funded
