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  • SUMMARY

  • TISSUE

  • BRAIN

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  • ACHE
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:103.9 nTPM
HPA Brain:234.8 nTPM
GTEx:103.9 nTPM
Pig:66.4 nTPM
Mouse:154.7 nTPM
Allen mouse:18.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

234.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 192.1
2226 Male, age 75, left hemisphere 243.8
1961 Female, age 42, unknown 140.4
Dorsomedial nucleus
nTPM: 101.9
2041 Female, age 72, unknown 134.7
2017 Female, age 42, unknown 96.4
1989 Male, age 62, unknown 74.6
Lateral hypothalamic area
nTPM: 234.8
2228 Male, age 66, unknown 282.5
2271 Male, age 75, both hemispheres 246.0
1791 Male, age 80, right hemisphere 237.1
2412 Male, age 62, unknown 173.8
Mammillary body
nTPM: 103.9
1923 Female, age 72, unknown 154.8
2413 Male, age 66, unknown 110.4
1948 Female, age 72, unknown 105.1
1834 Female, age 42, unknown 76.7
1945 Male, age 80, right hemisphere 72.6
Paraventricular nucleus
nTPM: 127.2
2700 Male, age 62, unknown 127.2
Preoptic area
nTPM: 130.9
1907 Male, age 80, right hemisphere 177.2
1861 Female, age 42, unknown 120.4
2414 Female, age 72, unknown 95.2
Supraoptic nucleus
nTPM: 112.8
2835 Female, age 72, unknown 162.4
2043 Male, age 62, unknown 95.0
1894 Female, age 72, unknown 80.9
Ventromedial nucleus
nTPM: 144.3
1982 Female, age 72, unknown 165.2
1822 Female, age 42, unknown 123.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

103.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 103.9
Samples: 257

Max nTPM: 255.5
Min nTPM: 7.0
Std nTPM: 53.0
Median nTPM: 105.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 255.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 238.4
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 222.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 220.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 219.1
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 218.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 215.2
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 215.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 211.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 200.2
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 199.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 198.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 191.1
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 190.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 185.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 185.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 184.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 184.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 181.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 180.9
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 180.5
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 179.7
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 177.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 177.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 176.9
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 176.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 175.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 175.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 174.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 173.8
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 170.9
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 170.3
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 169.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 167.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 167.5
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 167.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 166.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 165.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 165.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 162.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 162.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 161.0
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 160.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 159.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 156.0
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 152.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 152.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 152.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 151.7
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 151.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 150.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 150.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 149.3
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 147.4
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 144.1
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 143.9
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 143.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 143.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 142.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 140.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 140.1
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 139.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 138.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 138.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 137.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 136.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 136.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 136.2
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 136.0
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 135.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 135.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 135.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 134.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 134.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 133.3
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 131.7
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 131.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 130.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 130.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 129.6
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 129.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 129.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 128.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 128.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 127.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 127.6
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 127.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 126.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 126.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 125.9
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 125.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 125.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 125.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 123.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 123.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 123.1
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 123.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 122.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 120.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 120.0
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 119.7
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 119.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 118.7
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 118.3
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 118.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 117.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 117.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 117.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 117.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 116.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 116.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 116.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 115.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 115.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 114.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 114.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 113.9
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 113.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 113.4
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 113.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 113.1
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 113.0
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 109.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 109.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 109.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 107.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 107.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 105.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 105.3
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 105.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 104.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 103.6
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 103.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 100.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 99.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 98.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 98.4
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 97.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 96.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 96.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 95.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 95.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 94.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 91.8
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 91.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 90.3
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 90.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 89.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 89.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 89.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 89.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 89.2
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 89.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 86.4
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 86.2
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 85.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 85.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 85.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 84.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 84.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 84.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 84.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 82.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 81.6
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 79.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 78.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 77.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 77.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 77.1
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 75.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 74.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 74.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 73.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 73.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 72.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 70.8
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 70.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 69.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 69.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 68.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 67.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 67.4
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 67.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 67.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 66.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 66.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 65.5
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 65.1
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 63.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 62.9
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 62.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 62.3
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 61.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 61.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 61.4
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 60.1
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 57.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 57.8
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 57.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 57.4
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 57.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 57.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 56.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 54.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 53.7
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 52.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 51.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 50.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 50.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 49.6
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 49.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 48.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 47.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 47.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 46.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 46.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 42.3
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 42.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 42.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 42.0
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 41.3
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 40.7
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 39.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 39.0
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 38.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 36.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 35.5
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 35.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 34.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 34.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 34.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 34.0
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 32.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 32.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 31.3
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 31.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 30.9
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 30.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 29.8
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 29.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 25.3
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 23.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 22.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 22.1
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 20.7
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 20.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 19.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 19.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 17.5
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 15.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 14.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 13.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 13.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 9.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 8.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 7.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 7.0
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

66.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 66.4
Samples: 4

Max nTPM: 78.4
Min nTPM: 60.2
Sample A Female 78.4
Sample B Female 66.2
Sample C Male 60.2
Sample D Male 60.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

154.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 154.7
Samples: 4

Max nTPM: 173.8
Min nTPM: 135.3
Sample A Male 173.8
Sample B Male 170.9
Sample C Female 138.9
Sample D Female 135.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

18.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 18.2
68924841 Antisense, RP_050309_01_B04, Mouse strain C57BL/6J (56 days, male) 18.2
70301082 Antisense, RP_050309_01_B04, Mouse strain C57BL/6J (56 days, male) 13.9

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