HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:3483.4 nTPM
HPA Brain:1702.0 nTPM
GTEx:3483.4 nTPM
FANTOM5:1380.7 Scaled Tags Per Million
Pig:970.2 nTPM
Mouse:523.2 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041602Antibody CAB020769
Glial cells MediumHigh
Neuronal cells LowMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 1702.0
Sample id Sample description nTPM
Hippocampus
nTPM: 1702.0
1855 Male, age 76, left hemisphere 2045.8
2529 Female, age 94, left hemisphere 1835.4
1898 Male, age 80, left hemisphere 1707.3
2621 Female, age 67, right hemisphere 1691.5
1911 Female, age 85, right hemisphere 1547.7
2148 Female, age 91, left hemisphere 1384.4
Dentate gyrus
nTPM: 1526.2
2010 Male, age 76, both hemispheres 2009.9
2530 Female, age 94, left hemisphere 1795.4
2531 Female, age 67, both hemispheres 1444.6
2246 Female, age 85, both hemispheres 1422.1
2528 Male, age 74, both hemispheres 1379.9
1927 Female, age 91, both hemispheres 1105.4
Entorhinal gyrus
nTPM: 1545.6
1787 Male, age 76, left hemisphere 1854.0
2117 Female, age 91, right hemisphere 1823.1
2686 Male, age 75, right hemisphere 1741.0
2764 Male, age 80, right hemisphere 1475.1
1938 Female, age 85, left hemisphere 1227.9
2613 Female, age 94, left hemisphere 1152.6
Hippocampus, CA1
nTPM: 1472.1
2082 Female, age 91, right hemisphere 1630.1
2527 Male, age 74, both hemispheres 1599.4
2749 Male, age 80, left hemisphere 1478.1
2045 Male, age 76, both hemispheres 1420.8
1873 Female, age 85, both hemispheres 1232.0
Hippocampus, CA2
nTPM: 1511.0
2113 Female, age 91, right hemisphere 1693.5
1963 Male, age 80, left hemisphere 1585.7
1940 Female, age 85, left hemisphere 1541.7
2249 Male, age 74, both hemispheres 1482.5
2437 Female, age 94, left hemisphere 1424.7
1892 Male, age 76, both hemispheres 1337.9
Hippocampus, CA3
nTPM: 1397.8
1867 Male, age 76, both hemispheres 1733.8
2137 Male, age 80, left hemisphere 1598.7
2861 Female, age 67, both hemispheres 1440.7
1891 Female, age 85, both hemispheres 1316.6
2436 Male, age 74, both hemispheres 1284.3
2620 Female, age 94, left hemisphere 1012.6
Parahippocampal cortex
nTPM: 1522.9
2018 Male, age 76, both hemispheres 2239.2
2532 Female, age 72, left hemisphere 1762.3
2245 Female, age 91, both hemispheres 1728.9
2250 Female, age 67, right hemisphere 1569.0
2622 Female, age 67, right hemisphere 1511.7
2692 Male, age 74, both hemispheres 1480.9
1850 Male, age 80, both hemispheres 1328.0
1933 Female, age 85, both hemispheres 1245.0
1990 Female, age 91, right hemisphere 1242.8
2693 Female, age 94, both hemispheres 1121.2
Perirhinal gyrus
nTPM: 1331.8
2848 Male, age 76, right hemisphere 1387.4
1794 Male, age 80, right hemisphere 1362.1
1841 Female, age 85, right hemisphere 1346.8
2521 Female, age 94, right hemisphere 1339.2
1847 Female, age 91, left hemisphere 1223.4
Subiculum
nTPM: 1675.9
2042 Male, age 76, both hemispheres 2553.8
1901 Male, age 80, both hemispheres 1684.0
2619 Male, age 74, both hemispheres 1509.6
1977 Female, age 85, both hemispheres 1477.6
2729 Female, age 91, right hemisphere 1436.6
2438 Female, age 94, left hemisphere 1394.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 3483.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 3483.4
Samples: 255

Max nTPM: 13872.1
Min nTPM: 1002.7
Std nTPM: 1465.2
Median nTPM: 3204.6
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 13872.1
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 11567.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 7529.9
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 7283.6
GTEX-1NV8Z-0011-R1b-SM-F647K 60-69 years, male 6518.8
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 6305.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 6260.6
GTEX-1KANB-0011-R1a-SM-F3K5M 50-59 years, male 6155.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 6132.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 6086.6
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 6056.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1380.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1380.7
FF:10153-102I9 76 years, female 1497.4
FF:10169-103B7 60 years, female 1263.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 970.2
Pig sample Sample description nTPM
Subiculum
nTPM: 709.9
Samples: 4

Max nTPM: 914.0
Min nTPM: 562.4
Sample A Female 914.0
Sample B Female 661.5
Sample C Male 562.4
Sample D Male 701.7
Dorsal hippocampus
nTPM: 970.2
Samples: 4

Max nTPM: 1449.5
Min nTPM: 517.0
Sample A Female 1449.5
Sample B Female 739.0
Sample C Male 1175.3
Sample D Male 517.0
Entorhinal cortex
nTPM: 789.9
Samples: 4

Max nTPM: 953.3
Min nTPM: 554.9
Sample A Female 723.9
Sample B Female 927.6
Sample C Male 953.3
Sample D Male 554.9
Ventral hippocampus
nTPM: 729.0
Samples: 4

Max nTPM: 872.7
Min nTPM: 536.0
Sample A Female 748.9
Sample B Female 536.0
Sample C Male 872.7
Sample D Male 758.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 523.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 523.2
Samples: 4

Max nTPM: 545.1
Min nTPM: 500.5
Sample A Male 531.5
Sample B Male 515.6
Sample C Female 545.1
Sample D Female 500.5
Hippocampal formation
nTPM: 508.0
Samples: 4

Max nTPM: 600.1
Min nTPM: 449.9
Sample A Male 527.0
Sample B Male 455.0
Sample C Female 449.9
Sample D Female 600.1

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