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  • SUMMARY

  • TISSUE

  • BRAIN

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:2683.0 nTPM
HPA Brain:2817.2 nTPM
GTEx:2683.0 nTPM
Pig:1003.7 nTPM
Mouse:353.0 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2817.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 1548.6
2226 Male, age 75, left hemisphere 1802.0
1961 Female, age 42, unknown 1295.3
Dorsomedial nucleus
nTPM: 1578.7
2017 Female, age 42, unknown 1783.9
1989 Male, age 62, unknown 1703.1
2041 Female, age 72, unknown 1249.1
Lateral hypothalamic area
nTPM: 2126.9
2271 Male, age 75, both hemispheres 2569.0
2412 Male, age 62, unknown 2131.8
1791 Male, age 80, right hemisphere 2062.1
2228 Male, age 66, unknown 1744.8
Mammillary body
nTPM: 2444.3
1834 Female, age 42, unknown 3275.5
1945 Male, age 80, right hemisphere 2709.1
1948 Female, age 72, unknown 2312.9
1923 Female, age 72, unknown 2062.9
2413 Male, age 66, unknown 1860.9
Paraventricular nucleus
nTPM: 2108.7
2700 Male, age 62, unknown 2108.7
Preoptic area
nTPM: 1710.9
1861 Female, age 42, unknown 2065.9
2414 Female, age 72, unknown 1966.2
1907 Male, age 80, right hemisphere 1100.5
Supraoptic nucleus
nTPM: 2817.2
2043 Male, age 62, unknown 3689.2
1894 Female, age 72, unknown 2617.4
2835 Female, age 72, unknown 2145.0
Ventromedial nucleus
nTPM: 1363.2
1982 Female, age 72, unknown 1489.7
1822 Female, age 42, unknown 1236.7

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2683.0
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 2683.0
Samples: 257

Max nTPM: 11581.5
Min nTPM: 944.2
Std nTPM: 1375.5
Median nTPM: 2371.6
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 11581.5
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 8260.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 8101.1
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 7775.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 7311.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 6534.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 6142.1
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 5671.7
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 5198.9
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 5181.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 5079.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 5028.4
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 5004.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 4864.9
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 4862.5
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 4785.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 4697.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 4657.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 4589.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 4505.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 4501.3
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 4394.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 4387.8
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 4342.1
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 4317.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 4270.3
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 4221.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 4203.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 4200.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 4167.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 4163.1
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 4033.2
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 3988.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 3966.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 3926.6
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 3926.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 3883.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 3882.3
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 3874.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 3866.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 3848.6
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 3843.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 3835.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 3806.3
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 3765.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 3735.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 3728.9
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 3667.1
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 3645.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 3605.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 3597.4
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 3551.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 3515.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 3477.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 3463.6
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 3438.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 3420.8
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 3405.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 3404.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 3394.9
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 3394.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 3391.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 3388.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 3383.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 3369.7
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 3352.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 3302.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 3293.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 3268.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 3237.2
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 3224.2
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 3217.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 3153.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 3132.1
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 3127.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 3117.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 3054.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 3022.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 3018.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 2995.6
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 2984.6
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 2981.0
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 2977.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 2977.6
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 2957.2
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 2956.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 2939.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 2905.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 2902.9
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 2885.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 2869.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 2860.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 2857.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 2856.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 2826.1
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 2816.4
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 2804.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 2803.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 2757.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 2723.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 2718.6
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 2716.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 2681.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 2678.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 2672.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 2671.5
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 2656.1
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 2654.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 2643.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 2632.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 2628.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 2608.1
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 2607.4
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 2592.9
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 2561.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 2554.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 2540.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 2525.1
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 2524.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 2513.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 2465.1
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 2450.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 2438.2
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 2412.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 2407.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 2399.0
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 2389.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 2388.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 2371.6
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 2366.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 2366.3
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 2361.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 2355.1
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 2346.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 2307.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 2288.4
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 2276.3
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 2275.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 2254.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 2200.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 2164.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 2137.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 2134.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 2133.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 2108.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 2108.5
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 2097.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 2092.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 2092.5
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 2089.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 2085.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 2079.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 2066.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 2064.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 2044.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 2021.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 2007.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 2000.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 1966.7
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 1952.9
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 1952.1
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 1950.4
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 1936.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 1929.4
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 1928.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 1922.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 1917.2
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 1916.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 1914.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 1910.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 1909.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 1903.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 1900.4
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 1896.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 1881.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 1874.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 1865.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 1861.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 1860.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 1853.3
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 1849.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 1845.4
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 1844.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 1835.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 1831.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 1805.7
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 1786.0
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 1771.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 1761.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 1761.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 1749.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 1747.1
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 1745.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 1734.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 1711.2
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 1692.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 1692.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 1691.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 1688.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 1680.5
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 1667.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 1663.1
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 1647.1
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 1623.4
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 1616.7
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 1614.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 1608.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 1608.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 1588.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 1587.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 1576.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 1570.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 1563.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 1561.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 1551.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 1544.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 1535.2
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 1530.0
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 1524.5
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 1518.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 1514.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 1513.6
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 1494.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 1492.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 1489.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 1487.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 1484.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 1446.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 1439.0
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 1433.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 1433.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 1427.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 1426.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 1423.5
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 1401.1
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 1327.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 1320.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 1320.6
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 1282.6
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 1254.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 1218.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 1201.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 1177.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 1171.7
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 1137.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 1124.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 1120.8
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 1115.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 1098.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 1082.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 1073.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 1071.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 1065.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 1007.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 980.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 979.0
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 944.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1003.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 1003.7
Samples: 4

Max nTPM: 1292.8
Min nTPM: 557.6
Sample A Female 1292.8
Sample B Female 1063.3
Sample C Male 1101.2
Sample D Male 557.6

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

353.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 353.0
Samples: 4

Max nTPM: 384.2
Min nTPM: 315.9
Sample A Male 353.9
Sample B Male 384.2
Sample C Female 315.9
Sample D Female 358.0

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