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  • GNAO1
BRAIN AMYGDALA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Amygdala
Brain methods
AMYGDALA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:121.1 nTPM
HPA Brain:260.6 nTPM
GTEx:121.1 nTPM
FANTOM5:559.2 Scaled Tags Per Million
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

260.6
Sample id Sample description nTPM
Amygdala
nTPM: 214.2
2814 Male, age 76, right hemisphere 242.3
2517 Female, age 94, left hemisphere 229.8
2514 Male, age 75, right hemisphere 217.4
2695 Female, age 67, right hemisphere 201.2
1987 Female, age 91, left hemisphere 180.5
Basal amygdala
nTPM: 260.6
2685 Female, age 94, left hemisphere 315.5
2609 Male, age 75, right hemisphere 255.2
2827 Female, age 67, right hemisphere 254.7
2243 Female, age 91, right hemisphere 253.0
2110 Male, age 80, left hemisphere 245.6
1955 Male, age 76, both hemispheres 239.4
Central amygdala
nTPM: 243.4
2239 Male, age 80, left hemisphere 275.6
2826 Female, age 94, left hemisphere 269.9
2701 Female, age 91, right hemisphere 235.8
1905 Male, age 76, both hemispheres 228.9
2515 Male, age 75, right hemisphere 206.7
Corticomedial amygdala
nTPM: 236.5
2535 Female, age 67, right hemisphere 266.8
2429 Female, age 94, left hemisphere 251.1
2829 Male, age 80, left hemisphere 242.8
2240 Male, age 76, both hemispheres 225.4
2242 Female, age 91, right hemisphere 217.3
2428 Male, age 75, right hemisphere 215.5
Lateral amygdala
nTPM: 256.6
2534 Female, age 94, left hemisphere 287.4
1883 Male, age 76, both hemispheres 274.5
2516 Male, age 75, right hemisphere 258.3
2830 Female, age 67, right hemisphere 251.1
2255 Female, age 91, right hemisphere 242.3
2256 Male, age 80, left hemisphere 226.0

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

121.1
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 121.1
Samples: 181

Max nTPM: 235.0
Min nTPM: 58.3
Std nTPM: 29.7
Median nTPM: 120.1
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 235.0
GTEX-1RQEC-0011-R4b-SM-F342C 60-69 years, male 224.4
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 218.8
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 192.8
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 179.2
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 172.9
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 172.3
GTEX-1OJC4-0011-R4a-SM-F3K54 50-59 years, female 170.2
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 169.5
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 169.0
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 168.8
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 168.1
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 167.9
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 167.9
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 167.0
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 165.4
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 161.0
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 160.3
GTEX-1LVA9-0011-R4a-SM-F2TA2 50-59 years, male 160.2
GTEX-1N2EF-0011-R4a-SM-F341F 60-69 years, male 159.5
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 155.7
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 153.6
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 151.8
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 151.7
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 150.6
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 150.3
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 149.7
GTEX-1P4AB-0011-R4b-SM-F2T9S 50-59 years, male 148.7
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 146.6
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 146.3
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 144.8
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 144.4
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 144.3
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 143.6
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 143.2
GTEX-1KWVE-0011-R4a-SM-F3K5X 30-39 years, male 142.2
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 140.9
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 140.8
GTEX-11DYG-0011-R4b-SM-GJ3RG 60-69 years, male 140.0
GTEX-1PIIG-0011-R4a-SM-F2TAQ 30-39 years, male 139.5
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 138.3
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 137.6
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 137.4
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 137.4
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 137.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 137.1
GTEX-12WSC-0011-R4a-SM-H6Q8M 50-59 years, male 137.0
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 136.7
GTEX-1PPGY-0011-R4a-SM-F3K4F 60-69 years, male 136.4
GTEX-11OF3-0011-R4a-SM-GJ3RB 60-69 years, male 136.2
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 136.2
GTEX-1JMLX-0011-R4a-SM-EY5YJ 50-59 years, male 135.8
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 135.2
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 134.9
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 134.8
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 134.3
GTEX-11DXY-0011-R4b-SM-GI4VR 60-69 years, male 133.9
GTEX-1POEN-0011-R4b-SM-F3K4O 30-39 years, female 133.2
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 132.7
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 130.8
GTEX-117XS-0011-R4b-SM-GJ3PR 60-69 years, male 130.2
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 130.0
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 129.5
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 129.4
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 129.4
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 129.0
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 128.9
GTEX-14C5O-0011-R4b-SM-G9ERF 60-69 years, male 128.9
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 128.3
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 128.3
GTEX-1QP6S-0011-R4b-SM-F33ZY 40-49 years, male 128.3
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 127.5
GTEX-14BMV-0011-R4a-SM-H6Q7P 50-59 years, male 126.7
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 126.3
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 126.2
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 126.0
GTEX-1O9I2-0011-R4b-SM-F3K4K 50-59 years, male 125.7
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 125.6
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 125.5
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 125.4
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 124.6
GTEX-1JMOU-0011-R4b-SM-EY5ZL 60-69 years, female 124.2
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 122.9
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 122.7
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 122.6
GTEX-1LB8K-0011-R4b-SM-F6487 50-59 years, male 122.4
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 122.2
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 122.1
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 120.4
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 120.4
GTEX-11NV4-0011-R4a-SM-GI4XC 60-69 years, male 120.1
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 119.1
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 118.7
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 118.7
GTEX-1RDX4-0011-R4b-SM-F3K43 50-59 years, female 117.9
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 117.8
GTEX-111FC-0011-R4a-SM-GIN8K 60-69 years, male 117.7
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 117.5
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 117.5
GTEX-1JJ6O-0011-R4a-SM-EY5YM 60-69 years, male 117.5
GTEX-13FHO-0011-R4b-SM-H6611 60-69 years, male 117.4
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 117.2
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 116.5
GTEX-11GS4-0011-R4a-SM-GJ3RJ 60-69 years, male 115.9
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 115.2
GTEX-PVOW-0011-R4A-SM-H6Q8O 40-49 years, male 115.2
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 114.9
GTEX-15RJE-0011-R4a-SM-H7OH4 40-49 years, male 114.8
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 114.5
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 113.5
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 113.4
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 113.4
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 113.1
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 112.7
GTEX-1LKK1-0011-R4b-SM-EY5YA 50-59 years, female 112.5
GTEX-12ZZY-0011-R4a-SM-GIN9F 60-69 years, male 111.9
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 111.8
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 111.4
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 110.9
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 110.7
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 110.4
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 109.6
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 109.4
GTEX-147F4-0011-R4b-SM-GJ3R4 50-59 years, male 109.2
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 106.9
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 105.2
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 104.2
GTEX-1JN1M-0011-R4b-SM-F6494 60-69 years, female 103.3
GTEX-11GSO-0011-R4b-SM-GJ3R8 60-69 years, male 102.8
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 101.7
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 101.3
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 100.8
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 100.5
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 100.3
GTEX-1RQED-0011-R4b-SM-F2I2X 60-69 years, male 99.8
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 99.4
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 98.6
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 98.4
GTEX-145LU-0011-R4b-SM-5P9K1 50-59 years, male 98.0
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 97.4
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 96.6
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 96.0
GTEX-ZYY3-0011-R4a-SM-GQ1CY 60-69 years, female 95.5
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 95.2
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 95.1
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 94.4
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 93.7
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 93.5
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 93.2
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 91.0
GTEX-1PWST-0011-R4a-SM-F2T9X 70-79 years, male 90.8
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 90.6
GTEX-1NV8Z-0011-R4b-SM-G8LMZ 60-69 years, male 90.4
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 89.5
GTEX-1LH75-0011-R4a-SM-F2TAM 50-59 years, female 88.0
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 87.8
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 87.6
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 86.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 86.9
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 86.8
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 86.4
GTEX-ZZPT-0011-R4a-SM-GPRX4 50-59 years, male 86.4
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 84.4
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 81.6
GTEX-13QJC-0011-R4a-SM-H65ZP 60-69 years, female 81.4
GTEX-11ZTS-0011-R4b-SM-GINAQ 60-69 years, female 81.2
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 80.9
GTEX-1QMI2-0011-R4b-SM-F3K4R 60-69 years, male 80.8
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 80.5
GTEX-1RLM8-0011-R4a-SM-F2TBL 50-59 years, male 79.3
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 78.6
GTEX-1MJK2-0011-R4a-SM-F3426 50-59 years, male 77.7
GTEX-1117F-0011-R4b-SM-GI4VM 60-69 years, female 76.7
GTEX-13PLJ-0011-R4b-SM-GJ3R6 60-69 years, female 75.4
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 73.0
GTEX-1JMQK-0011-R4a-SM-G8LLQ 60-69 years, male 72.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 72.0
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 71.0
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 66.3
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 64.1
GTEX-1R46S-0011-R4b-SM-F2TBF 60-69 years, female 58.3
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AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

559.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 559.2
FF:10151-102I7 76 years, female 559.2

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