We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
GNAS
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • GNAS
TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Tissue methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1200.1 nTPM
HPA Brain:1230.9 nTPM
GTEx:1200.1 nTPM
FANTOM5:913.5 Scaled Tags Per Million
Pig:1285.1 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1230.9
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 995.3
2194 Female, age 79, both hemispheres 1355.0
1981 Female, age 72, midline 1227.6
2565 Male, age 75, midline 831.7
2048 Male, age 55, midline 805.9
2816 Male, age 47, midline 756.2
Cervical spinal cord, dorsal horn
nTPM: 1230.9
2721 Male, age 90, both hemispheres 1428.8
2069 Male, age 47, both hemispheres 1393.4
2297 Male, age 75, both hemispheres 1250.7
2173 Female, age 72, unknown 1245.9
1877 Male, age 55, unknown 1162.5
2296 Male, age 66, both hemispheres 903.8
Cervical spinal cord, ventral horn
nTPM: 984.3
2068 Male, age 55, unknown 1108.7
2295 Male, age 66, both hemispheres 1062.4
2820 Female, age 79, both hemispheres 1014.4
2480 Male, age 75, both hemispheres 1006.4
2098 Female, age 72, unknown 868.2
2809 Male, age 90, both hemispheres 845.6

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1200.1
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 1200.1
Samples: 204

Max nTPM: 2530.9
Min nTPM: 619.5
Std nTPM: 416.2
Median nTPM: 1081.8
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 2530.9
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 2437.7
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 2401.6
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 2387.4
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 2386.1
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 2330.9
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 2305.9
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 2302.5
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 2235.2
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 2206.9
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 2149.3
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 2090.4
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 2026.7
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 1958.2
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 1911.4
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 1902.8
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 1872.3
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 1854.0
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 1844.5
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 1795.4
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 1794.5
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 1750.2
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 1741.9
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 1733.1
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 1697.8
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 1685.5
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 1684.4
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 1675.0
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 1673.0
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 1670.6
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 1649.8
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 1615.0
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 1610.1
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 1610.0
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 1601.8
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 1569.0
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 1568.3
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 1561.2
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 1560.4
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 1555.0
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 1526.9
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 1510.7
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 1506.1
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 1485.1
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 1463.0
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 1460.9
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 1447.4
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 1439.1
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 1430.7
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 1423.4
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 1404.7
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 1375.9
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 1372.6
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 1361.0
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 1350.9
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 1343.1
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 1325.7
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 1316.9
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 1310.3
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 1309.5
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 1296.4
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 1292.6
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 1285.1
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 1278.5
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 1278.4
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 1272.7
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 1248.5
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 1246.7
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 1231.1
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 1230.8
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 1222.7
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 1220.8
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 1218.2
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 1214.2
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 1211.4
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 1209.2
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 1207.0
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 1206.3
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 1189.1
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 1174.9
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 1173.9
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 1167.9
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 1164.8
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 1163.3
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 1161.2
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 1160.3
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 1158.0
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 1152.9
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 1141.1
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 1140.8
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 1140.2
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 1136.1
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 1133.5
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 1123.0
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 1122.1
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 1116.7
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 1106.4
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 1092.8
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 1091.7
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 1088.3
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 1086.4
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 1086.1
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 1077.4
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 1076.6
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 1075.1
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 1072.9
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 1070.2
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 1068.4
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 1056.8
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 1056.8
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 1045.9
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 1045.7
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 1044.7
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 1040.4
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 1038.2
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 1036.2
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 1035.8
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 1032.3
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 1030.5
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 1028.4
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 1026.8
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 1022.5
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 1018.8
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 1010.6
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 1009.2
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 1004.6
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 1003.8
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 1003.1
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 989.8
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 988.3
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 979.8
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 976.4
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 975.7
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 974.5
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 971.8
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 967.6
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 963.9
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 958.8
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 955.2
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 954.6
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 951.2
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 943.2
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 939.3
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 927.8
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 926.7
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 921.9
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 921.2
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 915.5
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 915.5
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 910.5
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 903.0
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 901.9
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 898.3
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 893.2
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 891.6
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 891.4
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 890.3
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 882.2
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 880.2
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 874.0
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 872.6
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 872.1
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 868.5
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 860.4
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 859.7
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 858.3
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 847.8
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 841.3
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 837.8
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 835.3
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 831.2
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 828.0
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 823.3
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 822.9
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 821.3
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 820.4
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 818.5
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 818.0
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 812.7
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 807.5
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 807.2
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 800.8
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 796.6
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 795.7
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 787.2
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 774.9
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 773.7
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 772.0
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 758.9
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 754.1
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 753.6
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 751.4
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 750.6
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 716.1
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 715.7
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 703.5
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 698.8
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 676.6
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 671.7
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 665.5
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 652.1
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 627.2
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 625.5
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 619.5
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

913.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 913.5
FF:10181-103D1 60 years, female 1238.7
FF:10159-103A6 76 years, female 588.3

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1285.1
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 1285.1
Samples: 4

Max nTPM: 1496.6
Min nTPM: 1090.8
Sample A Female 1368.1
Sample B Female 1184.7
Sample C Male 1090.8
Sample D Male 1496.6
Ventral spinal cord
nTPM: 1164.0
Samples: 4

Max nTPM: 1320.7
Min nTPM: 987.9
Sample A Female 987.9
Sample B Female 1181.2
Sample C Male 1166.3
Sample D Male 1320.7

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo