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EPB41L1
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  • SUMMARY

  • TISSUE

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  • EPB41L1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:84.5 nTPM
HPA Brain:283.0 nTPM
GTEx:84.5 nTPM
Pig:138.2 nTPM
Mouse:112.3 nTPM
Allen mouse:9.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

283.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 248.0
1961 Female, age 42, unknown 274.7
2226 Male, age 75, left hemisphere 221.4
Dorsomedial nucleus
nTPM: 236.4
2017 Female, age 42, unknown 265.4
2041 Female, age 72, unknown 251.4
1989 Male, age 62, unknown 192.2
Lateral hypothalamic area
nTPM: 283.0
2271 Male, age 75, both hemispheres 314.1
1791 Male, age 80, right hemisphere 300.0
2228 Male, age 66, unknown 259.3
2412 Male, age 62, unknown 258.6
Mammillary body
nTPM: 251.5
1923 Female, age 72, unknown 271.8
1948 Female, age 72, unknown 265.8
1834 Female, age 42, unknown 259.4
2413 Male, age 66, unknown 238.4
1945 Male, age 80, right hemisphere 222.2
Paraventricular nucleus
nTPM: 271.3
2700 Male, age 62, unknown 271.3
Preoptic area
nTPM: 255.0
1861 Female, age 42, unknown 268.0
1907 Male, age 80, right hemisphere 261.1
2414 Female, age 72, unknown 235.7
Supraoptic nucleus
nTPM: 206.3
2835 Female, age 72, unknown 249.8
2043 Male, age 62, unknown 196.2
1894 Female, age 72, unknown 172.8
Ventromedial nucleus
nTPM: 263.9
1982 Female, age 72, unknown 275.8
1822 Female, age 42, unknown 252.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

84.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 84.5
Samples: 257

Max nTPM: 147.2
Min nTPM: 31.7
Std nTPM: 21.4
Median nTPM: 83.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 147.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 142.8
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 135.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 133.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 132.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 132.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 131.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 129.2
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 129.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 128.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 127.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 125.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 123.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 122.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 122.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 120.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 117.7
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 117.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 117.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 116.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 115.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 113.8
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 111.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 111.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 111.3
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 111.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 111.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 111.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 109.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 109.1
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 109.1
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 107.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 107.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 107.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 107.7
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 107.6
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 107.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 107.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 106.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 106.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 106.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 106.5
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 106.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 104.9
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 104.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 104.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 104.3
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 103.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 103.4
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 103.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 103.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 103.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 101.7
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 101.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 101.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 101.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 100.9
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 100.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 100.2
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 99.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 99.8
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 99.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 99.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 98.6
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 98.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 98.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 98.2
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 97.5
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 97.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 97.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 97.1
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 96.7
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 96.6
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 96.5
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 95.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 95.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 95.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 95.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 95.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 94.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 94.5
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 94.3
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 94.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 93.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 93.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 92.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 92.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 92.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 92.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 92.4
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 92.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 91.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 91.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 91.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 90.9
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 90.8
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 90.6
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 90.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 90.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 90.1
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 89.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 89.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 89.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 89.1
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 88.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 88.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 88.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 88.2
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 88.1
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 87.9
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 87.9
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 87.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 87.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 87.6
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 87.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 86.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 86.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 86.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 86.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 86.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 85.8
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 85.7
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 85.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 85.2
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 85.0
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 84.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 84.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 84.2
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 83.9
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 83.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 83.3
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 83.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 83.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 82.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 82.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 82.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 82.4
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 82.0
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 81.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 81.6
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 81.5
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 81.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 80.8
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 80.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 80.3
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 80.2
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 80.1
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 79.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 79.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 79.4
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 79.3
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 78.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 78.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 78.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 78.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 77.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 77.7
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 77.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 77.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 76.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 76.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 76.7
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 76.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 75.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 75.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 75.5
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 75.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 75.3
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 75.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 74.9
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 74.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 74.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 74.1
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 73.4
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 73.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 72.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 72.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 71.9
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 71.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 71.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 71.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 71.4
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 71.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 70.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 70.3
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 70.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 69.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 69.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 69.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 68.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 68.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 67.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 67.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 67.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 67.7
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 67.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 67.4
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 67.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 67.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 67.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 66.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 66.4
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 66.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 66.1
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 65.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 65.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 65.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 65.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 64.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 64.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 64.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 64.3
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 64.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 63.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 63.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 63.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 63.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 63.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 62.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 62.7
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 62.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 61.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 61.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 61.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 61.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 60.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 60.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 60.0
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 59.7
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 59.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 58.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 57.7
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 57.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 56.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 56.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 55.1
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 55.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 54.8
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 54.6
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 54.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 53.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 51.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 51.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 50.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 49.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 49.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 48.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 47.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 47.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 46.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 46.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 44.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 43.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 40.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 39.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 37.6
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 31.7
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

138.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 138.3
Samples: 4

Max nTPM: 167.7
Min nTPM: 110.0
Sample A Female 167.7
Sample B Female 141.8
Sample C Male 133.5
Sample D Male 110.0

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

112.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 112.4
Samples: 4

Max nTPM: 117.4
Min nTPM: 107.5
Sample A Male 107.5
Sample B Male 108.7
Sample C Female 117.4
Sample D Female 115.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

9.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 9.5
74047777 Antisense, RP_051214_02_A02, Mouse strain C57BL/6J (56 days, male) 18.4
68203494 Antisense, RP_041208_01_D02, Mouse strain C57BL/6J (56 days, male) 12.4
70795892 Antisense, RP_050712_02_B09, Mouse strain C57BL/6J (56 days, male) 5.0
74750065 Antisense, RP_060220_05_F07, Mouse strain C57BL/6J (56 days, male) 2.2

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