We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RPLP0
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • RPLP0
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
Tissue methods
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

GTEx:439.5 nTPM
FANTOM5:34.4 Scaled Tags Per Million
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA003512Antibody HPA073501
Glial cells Not detectedLow
Neuronal cells LowHigh




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

439.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 439.5
Samples: 300

Max nTPM: 1181.7
Min nTPM: 218.5
Std nTPM: 135.3
Median nTPM: 406.4
GTEX-1CB4J-0011-R5a-SM-9WG5Y 60-69 years, male 1181.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 997.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 888.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 852.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 801.7
GTEX-15DDE-0011-R5b-SM-7KULJ 50-59 years, female 799.4
GTEX-1NV5F-0011-R5b-SM-F3K3I 60-69 years, female 798.3
GTEX-1LH75-0011-R5b-SM-F2TAO 50-59 years, female 784.1
GTEX-1JMQK-0011-R5a-SM-G8LKV 60-69 years, male 771.4
GTEX-14E6C-0011-R5b-SM-G9ERG 40-49 years, male 762.2
GTEX-1192W-0011-R5a-SM-GI4VY 60-69 years, male 752.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 746.4
GTEX-11EMC-0011-R5a-SM-GJ3PK 60-69 years, female 715.9
GTEX-1JMQL-0011-R5a-SM-F3424 50-59 years, female 715.7
GTEX-1QEPI-0011-R5b-SM-F649S 60-69 years, female 709.2
GTEX-1R46S-0011-R5b-SM-F342A 60-69 years, female 697.1
GTEX-11TUW-0011-R5b-SM-5BC6Q 60-69 years, male 691.5
GTEX-1POEN-0011-R5b-SM-F2T9Z 30-39 years, female 691.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 689.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 689.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 688.8
GTEX-13N2G-0011-R5a-SM-5MR33 60-69 years, male 687.1
GTEX-13QJC-0011-R5a-SM-GJ3QH 60-69 years, female 676.4
GTEX-11ZU8-0011-R5a-SM-GJ3PY 60-69 years, male 676.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 675.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 659.8
GTEX-11EI6-0011-R5a-SM-GINAM 60-69 years, male 646.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 636.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 626.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 620.1
GTEX-14C5O-0011-R5a-SM-G8W84 60-69 years, male 613.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 610.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 605.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 592.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 587.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 587.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 576.0
GTEX-1LB8K-0011-R5b-SM-G8OKO 50-59 years, male 562.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 559.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 559.1
GTEX-1JMLX-0011-R5b-SM-EY5YK 50-59 years, male 557.9
GTEX-1MA7X-0011-R5a-SM-F341K 60-69 years, male 556.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 552.6
GTEX-1NV8Z-0011-R5a-SM-G8LKX 60-69 years, male 551.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 550.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 549.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 548.1
GTEX-1PWST-0011-R5a-SM-F648V 70-79 years, male 545.6
GTEX-12584-0011-R5b-SM-GIN96 40-49 years, male 544.9
GTEX-1LKK1-0011-R5b-SM-EY5YB 50-59 years, female 542.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 542.0
GTEX-1QP6S-0011-R5a-SM-F648S 40-49 years, male 540.3
GTEX-1N5O9-0011-R5a-SM-F3K46 60-69 years, male 539.6
GTEX-15UF6-0011-R5a-SM-H7OFA 70-79 years, female 539.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 536.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 535.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 532.7
GTEX-1RAZS-0011-R5b-SM-F341U 50-59 years, male 531.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 528.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 525.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 524.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 524.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 522.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 521.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 519.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 513.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 511.3
GTEX-1O9I2-0011-R5a-SM-F648P 50-59 years, male 511.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 509.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 507.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 507.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 506.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 506.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 506.1
GTEX-1KWVE-0011-R5a-SM-G8LLB 30-39 years, male 506.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 505.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 505.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 504.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 503.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 502.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 501.6
GTEX-1JMOU-0011-R5b-SM-EY5ZM 60-69 years, female 496.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 495.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 492.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 491.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 488.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 485.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 484.6
GTEX-ZYY3-0011-R5a-SM-H7OGH 60-69 years, female 484.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 481.3
GTEX-1117F-0011-R5a-SM-GI4VW 60-69 years, female 480.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 480.5
GTEX-1RLM8-0011-R5a-SM-F3K4P 50-59 years, male 480.4
GTEX-1LVA9-0011-R5a-SM-F6492 50-59 years, male 479.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 479.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 478.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 476.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 475.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 475.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 467.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 466.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 464.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 464.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 462.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 459.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 457.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 456.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 452.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 448.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 448.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 447.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 446.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 444.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 444.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 443.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 442.4
GTEX-16GPK-0011-R5b-SM-GRR3C 60-69 years, male 442.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 441.9
GTEX-1LVAO-0011-R5a-SM-EY5Y6 60-69 years, male 441.7
GTEX-UTHO-0011-R5A-SM-G8W6H 60-69 years, male 441.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 439.0
GTEX-1A8G7-0011-R5a-SM-H7OH3 60-69 years, male 438.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 436.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 435.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 434.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 434.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 429.5
GTEX-1MJK2-0011-R5b-SM-F3427 50-59 years, male 429.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 427.9
GTEX-1JN6P-0011-R5b-SM-G9EPO 60-69 years, male 427.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 425.9
GTEX-117XS-0011-R5b-SM-GJ3PP 60-69 years, male 424.6
GTEX-1MCQQ-0011-R5b-SM-GJ3RW 60-69 years, male 424.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 424.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 421.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 420.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 420.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 419.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 417.0
GTEX-1KD4Q-0011-R5a-SM-EY5Y8 40-49 years, male 417.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 415.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 414.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 414.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 413.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 413.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 412.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 411.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 409.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 409.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 406.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 406.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 405.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 403.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 402.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 401.5
GTEX-11GS4-0011-R5a-SM-GINAF 60-69 years, male 399.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 398.1
GTEX-1RDX4-0011-R5a-SM-F33ZH 50-59 years, female 397.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 397.6
GTEX-ZAK1-0011-R5a-SM-GRR32 50-59 years, female 397.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 396.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 396.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 395.0
GTEX-12126-0011-R5b-SM-GIN98 20-29 years, male 394.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 392.7
GTEX-15RJE-0011-R5b-SM-H6Q7T 40-49 years, male 392.7
GTEX-11GSO-0011-R5b-SM-GJ3RA 60-69 years, male 392.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 391.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 391.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 390.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 389.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 388.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 388.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 387.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 386.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 386.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 385.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 385.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 384.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 382.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 381.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 381.1
GTEX-111FC-0011-R5a-SM-GIN8L 60-69 years, male 379.5
GTEX-1ICLZ-0011-R5a-SM-CMKHM 60-69 years, male 378.0
GTEX-ZYFD-0011-R5a-SM-H6Q7M 50-59 years, male 377.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 377.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 375.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 374.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 373.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 373.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 373.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 372.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 372.7
GTEX-1LSNL-0011-R5a-SM-F3K49 50-59 years, male 372.6
GTEX-1RQEC-0011-R5a-SM-F2TBK 60-69 years, male 371.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 371.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 369.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 369.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 369.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 367.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 367.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 367.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 365.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 365.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 364.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 364.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 363.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 363.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 362.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 360.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 360.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 357.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 357.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 357.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 357.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 357.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 356.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 354.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 354.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 353.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 352.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 352.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 351.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 351.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 350.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 350.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 350.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 350.0
GTEX-WHSE-0011-R5A-SM-3P5ZO 20-29 years, male 348.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 347.7
GTEX-1PPGY-0011-R5a-SM-F33ZV 60-69 years, male 347.5
GTEX-1RQED-0011-R5b-SM-F3K56 60-69 years, male 346.9
GTEX-1OJC4-0011-R5b-SM-F3K55 50-59 years, female 345.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 345.6
GTEX-1N2EE-0011-R5a-SM-EY5YF 60-69 years, male 343.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 342.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 342.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 341.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 339.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 339.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 338.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 335.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 333.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 331.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 330.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 330.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 329.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 329.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 328.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 328.4
GTEX-ZAJG-0011-R5a-SM-GRR1S 50-59 years, female 327.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 326.5
GTEX-1N2EF-0011-R5a-SM-F3K4Y 60-69 years, male 324.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 322.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 318.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 318.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 318.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 317.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 316.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 315.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 314.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 314.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 312.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 311.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 310.9
GTEX-1PIIG-0011-R5b-SM-F341S 30-39 years, male 310.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 304.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 303.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 296.4
GTEX-ZZPT-0011-R5a-SM-GPRX5 50-59 years, male 294.7
GTEX-11ZUS-0011-R5b-SM-GIN9I 30-39 years, male 291.8
GTEX-1LSVX-0011-R3a-SM-EXURQ 60-69 years, male 291.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 290.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 289.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 288.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 286.7
GTEX-1QMI2-0011-R5b-SM-F3K4S 60-69 years, male 286.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 286.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 284.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 283.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 281.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 280.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 279.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 277.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 275.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 274.8
GTEX-1P4AB-0011-R5a-SM-F3K4I 50-59 years, male 274.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 272.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 271.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 271.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 270.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 269.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 268.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 266.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 263.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 260.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 257.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 246.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 226.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 218.5
Show allShow less

CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

34.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 34.4
FF:10164-103B2 76 years, female 34.4

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo