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TISSUE PRIMARY DATA SALIVARY GLAND Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Salivary gland
Tissue proteome
Salivary gland
Tissue methods
SALIVARY GLAND - Expression summary
Protein expression
Salivary glandi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1863.3 nTPM
HPA:1687.0 nTPM
GTEx:1863.3 nTPM
FANTOM5:376.4 Scaled Tags Per Million
SALIVARY GLAND - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SALIVARY GLAND - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA003512Antibody HPA073501
Glandular cells MediumMedium





SALIVARY GLAND - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1687.0
overview
Female, age 68
Salivary gland sample 216
nTPM: 1854.5
Cell types%
Glandular cells:
45

Ductal cells:
25

Adipocytes:
5

Other cell types:
25

overview
Male, age 60
Salivary gland sample 217
nTPM: 1415
Cell types%
Glandular cells:
55

Ductal cells:
20

Adipocytes:
5

Endothelial cells:
5

Other cell types:
15

overview
Female, age 21
Salivary gland sample 218
nTPM: 1791.6
Cell types%
Glandular cells:
55

Ductal cells:
15

Adipocytes:
5

Endothelial cells:
5

Other cell types:
20


SALIVARY GLAND - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1863.3
GTEx sample id Sample description nTPM
Minor Salivary Gland
Average nTPM: 1863.3
Samples: 181

Max nTPM: 4781.9
Min nTPM: 1103.9
Std nTPM: 535.0
Median nTPM: 1760.8
GTEX-Y5LM-1826-SM-4VDT9 40-49 years, female 4781.9
GTEX-ZLFU-2226-SM-EXUS7 40-49 years, male 4602.1
GTEX-ZLWG-2026-SM-DO11F 50-59 years, female 3512.4
GTEX-ZF29-2126-SM-DNZYX 60-69 years, female 3499.4
GTEX-1R9PM-1726-SM-E76T2 20-29 years, male 3353.1
GTEX-ZT9W-2126-SM-51MSF 50-59 years, male 3264.0
GTEX-1HCU7-0126-SM-C1YR3 50-59 years, male 3146.3
GTEX-12BJ1-2226-SM-5BC6G 60-69 years, male 3125.9
GTEX-1O97I-2826-SM-HPAEO 60-69 years, male 3059.6
GTEX-13QBU-2126-SM-5KLZN 40-49 years, female 2694.9
GTEX-11EMC-2526-SM-5PNVU 60-69 years, female 2678.3
GTEX-1R9K4-0526-SM-E76P1 60-69 years, male 2648.9
GTEX-11ZTS-3026-SM-5EQM7 60-69 years, female 2594.7
GTEX-1NSGN-0626-SM-E9J35 50-59 years, male 2576.9
GTEX-1PDJ9-2126-SM-HPAFH 20-29 years, male 2538.3
GTEX-18D9U-2226-SM-7KFTN 40-49 years, male 2443.4
GTEX-14E1K-2626-SM-664OJ 50-59 years, male 2401.5
GTEX-1S5ZU-0926-SM-HPAEX 20-29 years, female 2399.0
GTEX-1CB4I-2526-SM-7MKG1 50-59 years, male 2398.6
GTEX-15EU6-2626-SM-7KUN4 50-59 years, male 2371.5
GTEX-1192X-2926-SM-5N9BA 50-59 years, male 2346.7
GTEX-1339X-2326-SM-5HL5B 40-49 years, male 2338.3
GTEX-ZP4G-1926-SM-57WDZ 20-29 years, female 2327.8
GTEX-ZPU1-2326-SM-57WEP 40-49 years, male 2303.9
GTEX-ZA64-1726-SM-5CVMF 20-29 years, male 2293.1
GTEX-15RJE-2726-SM-6LPJ1 40-49 years, male 2275.6
GTEX-WH7G-2126-SM-4M1XU 40-49 years, male 2234.8
GTEX-13OVI-2326-SM-5KM47 60-69 years, female 2228.9
GTEX-1NHNU-2226-SM-GRR2I 50-59 years, male 2210.7
GTEX-1OJC3-1026-SM-E6CQK 20-29 years, male 2201.1
GTEX-XMK1-2626-SM-4B65R 40-49 years, male 2199.7
GTEX-1POEN-2226-SM-DPRXV 30-39 years, female 2154.4
GTEX-11P81-2026-SM-5P9GT 30-39 years, female 2139.0
GTEX-W5X1-2426-SM-HPAGA 40-49 years, female 2137.6
GTEX-18QFQ-0626-SM-718AW 30-39 years, male 2136.2
GTEX-YJ8A-1826-SM-GNTAB 20-29 years, male 2121.5
GTEX-18A7B-2826-SM-7KFTK 70-79 years, male 2116.9
GTEX-1JN1M-2426-SM-ARU93 60-69 years, female 2100.4
GTEX-Y5V6-2226-SM-4VDTC 60-69 years, male 2081.4
GTEX-ZE7O-2926-SM-51MSG 50-59 years, female 2081.1
GTEX-131XH-2626-SM-5GCNP 50-59 years, male 2074.7
GTEX-1RNSC-2926-SM-EV79L 60-69 years, male 2059.9
GTEX-1PIEJ-0626-SM-DTX99 20-29 years, female 2056.0
GTEX-1MGNQ-1926-SM-DTX8L 40-49 years, male 2036.7
GTEX-11P82-0926-SM-5986X 20-29 years, male 2013.6
GTEX-1117F-3026-SM-5GZYU 60-69 years, female 2008.7
GTEX-1QP9N-2026-SM-DPRZT 30-39 years, male 2006.5
GTEX-12WSN-2226-SM-5DUXT 40-49 years, male 2004.2
GTEX-11WQK-2926-SM-5EQKT 50-59 years, male 2003.4
GTEX-1I4MK-1326-SM-B2LWT 50-59 years, female 2002.9
GTEX-XGQ4-2626-SM-4AT6B 50-59 years, male 1996.0
GTEX-1RQED-2926-SM-HPAFT 60-69 years, male 1993.0
GTEX-1GPI7-0326-SM-7MKH6 20-29 years, male 1992.3
GTEX-1C64O-0626-SM-7DHL1 60-69 years, male 1983.2
GTEX-ZQUD-2126-SM-51MSY 30-39 years, male 1983.2
GTEX-12WSL-2126-SM-5GCNG 50-59 years, male 1975.0
GTEX-1S83E-0626-SM-E9TKC 40-49 years, male 1974.0
GTEX-WFJO-2026-SM-4LVM3 30-39 years, male 1965.0
GTEX-17KNJ-2726-SM-7KFRE 50-59 years, male 1934.3
GTEX-1LSNL-2626-SM-EV7AT 50-59 years, male 1930.5
GTEX-15SHV-2226-SM-6M464 60-69 years, male 1914.9
GTEX-1R9PO-2626-SM-E6CPU 60-69 years, female 1907.6
GTEX-1GMR2-2026-SM-7MKHK 50-59 years, male 1903.6
GTEX-1AMEY-1126-SM-72D79 30-39 years, female 1899.2
GTEX-XV7Q-2426-SM-4BRV8 40-49 years, female 1898.8
GTEX-WY7C-1426-SM-4OND1 50-59 years, male 1896.5
GTEX-1LVA9-2526-SM-EVR5H 50-59 years, male 1871.7
GTEX-X261-2426-SM-4PQZU 50-59 years, male 1866.2
GTEX-13113-1526-SM-5EGHV 60-69 years, female 1858.3
GTEX-WOFM-2126-SM-4M9R4 20-29 years, male 1852.9
GTEX-1KD4Q-2526-SM-CXZKL 40-49 years, male 1851.4
GTEX-1QCLZ-2526-SM-EXUST 60-69 years, female 1849.8
GTEX-YF7O-2226-SM-5CVN8 50-59 years, male 1848.4
GTEX-13OVL-2926-SM-5IFG3 50-59 years, male 1847.8
GTEX-Y3I4-1926-SM-4TT8L 50-59 years, male 1845.9
GTEX-1ICLY-0626-SM-GA915 50-59 years, male 1845.3
GTEX-1KANC-1326-SM-CYPT8 50-59 years, female 1842.2
GTEX-1HFI6-2826-SM-GA91I 40-49 years, male 1834.6
GTEX-1C4CL-2026-SM-731EB 30-39 years, male 1820.4
GTEX-14PN4-2526-SM-686ZG 50-59 years, male 1820.2
GTEX-1I6K7-0926-SM-A96SV 40-49 years, male 1810.4
GTEX-1A3MV-1726-SM-72D68 30-39 years, male 1803.7
GTEX-1LC47-2426-SM-DHXKK 60-69 years, male 1799.2
GTEX-1LVAM-0626-SM-HPAFZ 50-59 years, female 1795.3
GTEX-1C6VR-0726-SM-7P8OV 60-69 years, male 1792.3
GTEX-1S5VW-1026-SM-HK797 60-69 years, male 1787.4
GTEX-1JKYR-0726-SM-AHZ3K 20-29 years, male 1783.4
GTEX-1GTWX-2526-SM-9JGHG 60-69 years, male 1781.8
GTEX-1QP28-2026-SM-F2I3M 50-59 years, female 1766.7
GTEX-1KD5A-2226-SM-EV79U 50-59 years, male 1761.5
GTEX-13111-2326-SM-5LZUQ 50-59 years, male 1760.8
GTEX-1EH9U-2926-SM-7DHLX 60-69 years, male 1753.7
GTEX-1LH75-2726-SM-HL11E 50-59 years, female 1753.5
GTEX-Y111-2626-SM-4TT24 50-59 years, male 1753.4
GTEX-14B4R-1426-SM-5Q5CG 30-39 years, male 1751.2
GTEX-11NV4-1926-SM-5N9D4 60-69 years, male 1749.3
GTEX-1AX8Z-0626-SM-731EH 60-69 years, male 1748.7
GTEX-1IOXB-2826-SM-AHZ32 50-59 years, male 1745.4
GTEX-X3Y1-1926-SM-4PQZO 40-49 years, male 1741.1
GTEX-ZAB5-2326-SM-5IJFR 50-59 years, male 1724.9
GTEX-1314G-2026-SM-5LZUM 30-39 years, male 1724.4
GTEX-18A67-0626-SM-7KFSL 50-59 years, male 1718.8
GTEX-14PJN-1726-SM-69LO7 30-39 years, male 1717.3
GTEX-11EQ9-2026-SM-5P9JI 30-39 years, male 1713.8
GTEX-13JVG-2926-SM-5J2N9 60-69 years, male 1707.3
GTEX-1445S-2926-SM-5O993 60-69 years, male 1705.5
GTEX-17MFQ-1626-SM-7938Z 20-29 years, male 1697.8
GTEX-WHSB-2326-SM-4M1XK 50-59 years, male 1686.9
GTEX-13VXT-1726-SM-5IFF5 20-29 years, female 1678.7
GTEX-1MCC2-2226-SM-EV7AJ 30-39 years, female 1674.2
GTEX-Z9EW-1426-SM-HPAG9 40-49 years, male 1664.6
GTEX-1H4P4-2026-SM-9WPNV 50-59 years, male 1661.4
GTEX-13NYB-2426-SM-5IFF4 40-49 years, male 1654.8
GTEX-1HSMP-1926-SM-GA8Z5 70-79 years, male 1649.2
GTEX-1IKJJ-2826-SM-GA8ZM 60-69 years, male 1649.0
GTEX-1LVAO-2626-SM-EVR4S 60-69 years, male 1646.7
GTEX-13OVK-1826-SM-6PALE 40-49 years, male 1644.8
GTEX-1PPH8-1526-SM-E6CQO 20-29 years, male 1644.7
GTEX-12WSM-1826-SM-5BC64 60-69 years, male 1643.3
GTEX-146FR-1226-SM-5MR78 60-69 years, female 1634.6
GTEX-1I6K6-0626-SM-ARU7J 30-39 years, male 1626.9
GTEX-1AYD5-2726-SM-7MXVG 50-59 years, male 1622.0
GTEX-13NYC-2626-SM-5K7VN 60-69 years, male 1616.2
GTEX-1MCQQ-2226-SM-DLHC4 60-69 years, male 1611.3
GTEX-1IDJC-1626-SM-AHZ2R 50-59 years, male 1609.9
GTEX-1J1R8-1826-SM-AHZ3B 40-49 years, male 1601.7
GTEX-1R9K5-0626-SM-DPRZB 50-59 years, male 1601.2
GTEX-14PJ3-1526-SM-664O9 50-59 years, male 1600.9
GTEX-1IDJD-2526-SM-C1YSA 30-39 years, male 1599.9
GTEX-ZG7Y-2426-SM-DO11H 50-59 years, male 1592.0
GTEX-13QJC-2326-SM-5Q5CD 60-69 years, female 1586.2
GTEX-11TUW-2426-SM-5EQKB 60-69 years, male 1577.0
GTEX-13CF2-2426-SM-5LZYL 60-69 years, male 1545.6
GTEX-131XF-2826-SM-5EGKH 60-69 years, male 1545.5
GTEX-1IY9M-2926-SM-A96TH 60-69 years, male 1543.8
GTEX-1HFI7-2426-SM-B2LXV 50-59 years, female 1541.7
GTEX-YB5K-1726-SM-5IFIZ 40-49 years, female 1537.0
GTEX-1JN6P-2526-SM-CNNPX 60-69 years, male 1530.9
GTEX-1HR9M-2526-SM-A9G3J 60-69 years, male 1517.4
GTEX-15SDE-1226-SM-HAV36 50-59 years, female 1513.2
GTEX-1J8QM-1826-SM-A96TA 60-69 years, female 1505.1
GTEX-1B97J-2126-SM-79OL6 50-59 years, female 1503.7
GTEX-13G51-2426-SM-5LZY8 60-69 years, male 1499.8
GTEX-1RAZA-0626-SM-EAZ4H 20-29 years, male 1491.2
GTEX-X15G-2126-SM-4PQZR 50-59 years, female 1488.2
GTEX-145ME-1626-SM-5RQI3 40-49 years, female 1484.3
GTEX-1B8KZ-1726-SM-73KV7 50-59 years, male 1483.9
GTEX-1AX9K-2126-SM-72D7K 50-59 years, male 1482.3
GTEX-ZC5H-2726-SM-5KLZW 40-49 years, female 1476.6
GTEX-ZXG5-2826-SM-5NQ8T 60-69 years, male 1469.1
GTEX-1GN1V-2926-SM-9JGI3 60-69 years, male 1445.5
GTEX-1LKK1-2926-SM-EVR4Z 50-59 years, female 1435.3
GTEX-1S82P-0726-SM-EVR4O 60-69 years, female 1428.2
GTEX-X5EB-1726-SM-4E3J7 40-49 years, male 1423.1
GTEX-1I1HK-2526-SM-A96SM 60-69 years, male 1423.0
GTEX-111FC-2926-SM-5GZY7 60-69 years, male 1415.5
GTEX-1HSEH-1826-SM-A96SA 60-69 years, male 1395.2
GTEX-178AV-1426-SM-6LLID 40-49 years, male 1378.6
GTEX-1QEPI-0626-SM-E76QE 60-69 years, female 1376.2
GTEX-15CHC-1226-SM-686ZH 60-69 years, female 1376.1
GTEX-1GF9X-0226-SM-7P8SM 40-49 years, female 1349.9
GTEX-1GN1W-2526-SM-9JGHX 50-59 years, female 1349.2
GTEX-1IDJV-2326-SM-GA8ZL 60-69 years, male 1348.5
GTEX-14JIY-3026-SM-6EU1R 60-69 years, male 1340.0
GTEX-1B8SF-1826-SM-731DJ 60-69 years, male 1318.4
GTEX-1QMI2-0426-SM-EWRND 60-69 years, male 1313.4
GTEX-1HSGN-0626-SM-A9G2E 40-49 years, female 1312.1
GTEX-1C64N-2926-SM-79OLM 50-59 years, male 1309.4
GTEX-13O21-1926-SM-5MR39 50-59 years, male 1292.4
GTEX-WYVS-2026-SM-4RGNS 40-49 years, female 1283.1
GTEX-1LBAC-0626-SM-D3L9T 20-29 years, male 1278.8
GTEX-1B932-0626-SM-731EM 40-49 years, female 1271.4
GTEX-1J8EW-2826-SM-A96T9 60-69 years, female 1250.4
GTEX-1HGF4-2326-SM-GA91Q 60-69 years, male 1241.7
GTEX-1P4AB-2926-SM-EXOJR 50-59 years, male 1224.9
GTEX-1IE54-0826-SM-AHZ2Z 40-49 years, female 1211.3
GTEX-1GZ2Q-2526-SM-9KNVW 40-49 years, male 1205.6
GTEX-1HSMQ-0926-SM-A96SI 50-59 years, male 1188.1
GTEX-11ZTT-2226-SM-5CVLP 60-69 years, female 1151.7
GTEX-1OJC4-3126-SM-EXOJK 50-59 years, female 1147.1
GTEX-1H1CY-2326-SM-9OSXW 60-69 years, female 1103.9
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SALIVARY GLAND - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

376.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Parotid gland
Scaled Tags Per Million: 376.4
FF:10199-103F1 23 years, male 376.4
Salivary gland
Scaled Tags Per Million: 313.3
FF:10093-102C3 16-60 years, mixed 313.3
Submaxillary gland
Scaled Tags Per Million: 191.5
FF:10202-103F4 24 years, male 191.5

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