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BETA
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  • RGS1
IMMUNE CELL MONOCYTES Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cells
Monocytes
Immune cell methods
MONOCYTES - Expression summary
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA:0.1 nTPM
Monaco:47.2 nTPM
Schmiedel:164.9 TPM

MONOCYTES - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

0.1
HPA sample nTPM
Classical monocyte
nTPM: 0.0
Samples: 6

Max nTPM: 0.2
Min nTPM: 0.0
P10809_1003 0.0
P10809_1020 0.2
P10809_1039 0.0
P10809_1058 0.0
P10809_1080 0.0
P10809_1107 0.0
Intermediate monocyte
nTPM: 0.2
Samples: 6

Max nTPM: 0.9
Min nTPM: 0.0
P10809_1004 0.0
P10809_1023 0.9
P10809_1042 0.0
P10809_1061 0.0
P10809_1081 0.1
P10809_1108 0.0
Non-classical monocyte
nTPM: 0.1
Samples: 5

Max nTPM: 0.6
Min nTPM: 0.0
P10809_1005 0.0
P10809_1053 0.0
P10809_1072 0.0
P10809_1082 0.0
P10809_1109 0.6

MONOCYTES - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

47.2
Monaco sample nTPM
Classical monocyte
nTPM: 14.4
Samples: 4

Max nTPM: 21.7
Min nTPM: 5.1
RHH5313_R3680 5.1
RHH5221_R3593 20.4
RHH5250_R3622 21.7
RHH5279_R3651 10.5
Intermediate monocyte
nTPM: 47.3
Samples: 4

Max nTPM: 90.1
Min nTPM: 19.0
RHH5314_R3681 22.2
RHH5222_R3594 90.1
RHH5251_R3623 57.7
RHH5280_R3652 19.0
Non-classical monocyte
nTPM: 44.4
Samples: 4

Max nTPM: 86.6
Min nTPM: 12.3
RHH5315_R3682 12.3
RHH5223_R3595 57.0
RHH5252_R3624 86.6
RHH5281_R3653 21.6

MONOCYTES - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max subtype TPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

164.9
Schmiedel sample id TPM
Classical monocyte
TPM: 164.9
Samples: 91

Max TPM: 720.3
Min TPM: 18.7
MONOCYTES_1 720.3
MONOCYTES_2 605.9
MONOCYTES_3 485.8
MONOCYTES_4 456.4
MONOCYTES_5 451.9
MONOCYTES_6 436.5
MONOCYTES_7 429.0
MONOCYTES_8 410.1
MONOCYTES_9 403.9
MONOCYTES_10 398.9
MONOCYTES_11 373.7
MONOCYTES_12 368.4
MONOCYTES_13 339.7
MONOCYTES_14 335.9
MONOCYTES_15 334.8
MONOCYTES_16 271.6
MONOCYTES_17 251.2
MONOCYTES_18 238.8
MONOCYTES_19 229.4
MONOCYTES_20 217.5
MONOCYTES_21 217.3
MONOCYTES_22 208.5
MONOCYTES_23 190.8
MONOCYTES_24 184.3
MONOCYTES_25 182.9
MONOCYTES_26 182.8
MONOCYTES_27 182.8
MONOCYTES_28 181.3
MONOCYTES_29 171.5
MONOCYTES_30 164.4
MONOCYTES_31 161.9
MONOCYTES_32 160.4
MONOCYTES_33 152.9
MONOCYTES_34 145.9
MONOCYTES_35 144.8
MONOCYTES_36 144.0
MONOCYTES_37 143.2
MONOCYTES_38 136.2
MONOCYTES_39 134.7
MONOCYTES_40 132.7
MONOCYTES_41 129.6
MONOCYTES_42 128.8
MONOCYTES_43 127.3
MONOCYTES_44 117.9
MONOCYTES_45 116.2
MONOCYTES_46 116.0
MONOCYTES_47 115.3
MONOCYTES_48 113.7
MONOCYTES_49 113.4
MONOCYTES_50 113.0
MONOCYTES_51 110.9
MONOCYTES_52 110.7
MONOCYTES_53 107.6
MONOCYTES_54 105.0
MONOCYTES_55 104.8
MONOCYTES_56 102.6
MONOCYTES_57 96.4
MONOCYTES_58 92.3
MONOCYTES_59 90.5
MONOCYTES_60 90.3
MONOCYTES_61 86.7
MONOCYTES_62 86.6
MONOCYTES_63 82.5
MONOCYTES_64 78.0
MONOCYTES_65 74.1
MONOCYTES_66 73.4
MONOCYTES_67 73.1
MONOCYTES_68 70.0
MONOCYTES_69 68.3
MONOCYTES_70 63.3
MONOCYTES_71 62.7
MONOCYTES_72 62.5
MONOCYTES_73 61.3
MONOCYTES_74 60.9
MONOCYTES_75 55.7
MONOCYTES_76 54.5
MONOCYTES_77 53.4
MONOCYTES_78 52.6
MONOCYTES_79 52.1
MONOCYTES_80 51.8
MONOCYTES_81 48.6
MONOCYTES_82 48.4
MONOCYTES_83 47.3
MONOCYTES_84 43.9
MONOCYTES_85 37.3
MONOCYTES_86 34.9
MONOCYTES_87 33.2
MONOCYTES_88 32.8
MONOCYTES_89 27.8
MONOCYTES_90 22.9
MONOCYTES_91 18.7
Show allShow less
Non-classical monocyte
TPM: 45.1
Samples: 90

Max TPM: 275.8
Min TPM: 3.5
M2_1 275.8
M2_2 171.9
M2_3 158.6
M2_4 157.7
M2_5 127.7
M2_6 90.6
M2_7 89.6
M2_8 89.2
M2_9 87.1
M2_10 86.9
M2_11 84.7
M2_12 84.4
M2_13 76.1
M2_14 76.0
M2_15 75.1
M2_16 74.9
M2_17 73.4
M2_18 71.4
M2_19 69.6
M2_20 67.4
M2_21 63.8
M2_22 61.0
M2_23 60.5
M2_24 60.1
M2_25 57.8
M2_26 55.9
M2_27 54.2
M2_28 52.9
M2_29 52.9
M2_30 50.4
M2_31 50.2
M2_32 48.1
M2_33 46.9
M2_34 43.8
M2_35 43.0
M2_36 42.9
M2_37 40.5
M2_38 39.6
M2_39 37.6
M2_40 36.7
M2_41 35.3
M2_42 34.6
M2_43 33.6
M2_44 31.5
M2_45 30.1
M2_46 29.7
M2_47 29.2
M2_48 28.5
M2_49 28.2
M2_50 26.7
M2_51 26.4
M2_52 25.6
M2_53 25.6
M2_54 25.0
M2_55 24.7
M2_56 24.6
M2_57 23.6
M2_58 23.4
M2_59 23.2
M2_60 23.0
M2_61 23.0
M2_62 22.3
M2_63 21.8
M2_64 19.5
M2_65 19.2
M2_66 18.9
M2_67 18.5
M2_68 17.6
M2_69 16.4
M2_70 16.2
M2_71 15.8
M2_72 15.4
M2_73 15.3
M2_74 15.3
M2_75 14.8
M2_76 12.5
M2_77 12.3
M2_78 12.3
M2_79 12.0
M2_80 11.8
M2_81 11.8
M2_82 11.4
M2_83 11.2
M2_84 10.5
M2_85 9.6
M2_86 9.1
M2_87 8.7
M2_88 6.0
M2_89 5.0
M2_90 3.5
Show allShow less

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