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BETA
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  • PABPC4
IMMUNE CELL MONOCYTES Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cells
Monocytes
Immune cell methods
MONOCYTES - Expression summary
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA:33.1 nTPM
Monaco:47.7 nTPM
Schmiedel:271.1 TPM

MONOCYTES - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

33.1
HPA sample nTPM
Classical monocyte
nTPM: 18.2
Samples: 6

Max nTPM: 25.9
Min nTPM: 10.8
P10809_1003 10.8
P10809_1020 15.2
P10809_1039 17.0
P10809_1058 21.4
P10809_1080 19.0
P10809_1107 25.9
Intermediate monocyte
nTPM: 23.0
Samples: 6

Max nTPM: 34.0
Min nTPM: 14.1
P10809_1004 15.9
P10809_1023 29.4
P10809_1042 20.0
P10809_1061 14.1
P10809_1081 24.5
P10809_1108 34.0
Non-classical monocyte
nTPM: 33.2
Samples: 5

Max nTPM: 56.9
Min nTPM: 22.1
P10809_1005 22.1
P10809_1053 32.4
P10809_1072 56.9
P10809_1082 24.8
P10809_1109 29.7

MONOCYTES - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

47.7
Monaco sample nTPM
Classical monocyte
nTPM: 24.9
Samples: 4

Max nTPM: 28.2
Min nTPM: 20.0
RHH5313_R3680 23.2
RHH5221_R3593 20.0
RHH5250_R3622 28.2
RHH5279_R3651 28.2
Intermediate monocyte
nTPM: 47.7
Samples: 4

Max nTPM: 72.5
Min nTPM: 24.4
RHH5314_R3681 24.4
RHH5222_R3594 34.0
RHH5251_R3623 59.8
RHH5280_R3652 72.5
Non-classical monocyte
nTPM: 42.0
Samples: 4

Max nTPM: 58.2
Min nTPM: 20.6
RHH5315_R3682 58.2
RHH5223_R3595 20.6
RHH5252_R3624 41.5
RHH5281_R3653 47.7

MONOCYTES - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max subtype TPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

271.1
Schmiedel sample id TPM
Classical monocyte
TPM: 122.9
Samples: 91

Max TPM: 161.7
Min TPM: 85.6
MONOCYTES_1 161.7
MONOCYTES_2 156.3
MONOCYTES_3 155.0
MONOCYTES_4 150.3
MONOCYTES_5 149.7
MONOCYTES_6 144.0
MONOCYTES_7 143.9
MONOCYTES_8 142.5
MONOCYTES_9 141.5
MONOCYTES_10 140.3
MONOCYTES_11 140.3
MONOCYTES_12 140.0
MONOCYTES_13 139.5
MONOCYTES_14 139.1
MONOCYTES_15 139.0
MONOCYTES_16 138.6
MONOCYTES_17 137.9
MONOCYTES_18 137.8
MONOCYTES_19 137.2
MONOCYTES_20 136.5
MONOCYTES_21 135.9
MONOCYTES_22 135.6
MONOCYTES_23 135.5
MONOCYTES_24 135.2
MONOCYTES_25 134.3
MONOCYTES_26 132.9
MONOCYTES_27 132.7
MONOCYTES_28 132.1
MONOCYTES_29 132.0
MONOCYTES_30 130.9
MONOCYTES_31 130.4
MONOCYTES_32 130.4
MONOCYTES_33 129.5
MONOCYTES_34 128.4
MONOCYTES_35 128.2
MONOCYTES_36 127.8
MONOCYTES_37 127.7
MONOCYTES_38 127.3
MONOCYTES_39 127.3
MONOCYTES_40 126.7
MONOCYTES_41 126.6
MONOCYTES_42 125.8
MONOCYTES_43 125.7
MONOCYTES_44 125.1
MONOCYTES_45 124.9
MONOCYTES_46 124.6
MONOCYTES_47 123.6
MONOCYTES_48 123.2
MONOCYTES_49 122.2
MONOCYTES_50 121.7
MONOCYTES_51 120.2
MONOCYTES_52 118.7
MONOCYTES_53 117.9
MONOCYTES_54 117.2
MONOCYTES_55 116.2
MONOCYTES_56 115.3
MONOCYTES_57 115.0
MONOCYTES_58 114.2
MONOCYTES_59 113.5
MONOCYTES_60 113.4
MONOCYTES_61 113.1
MONOCYTES_62 112.4
MONOCYTES_63 112.2
MONOCYTES_64 111.9
MONOCYTES_65 111.8
MONOCYTES_66 111.6
MONOCYTES_67 111.3
MONOCYTES_68 111.1
MONOCYTES_69 110.5
MONOCYTES_70 110.3
MONOCYTES_71 109.9
MONOCYTES_72 109.9
MONOCYTES_73 109.7
MONOCYTES_74 109.2
MONOCYTES_75 109.2
MONOCYTES_76 107.6
MONOCYTES_77 106.3
MONOCYTES_78 106.2
MONOCYTES_79 106.1
MONOCYTES_80 105.7
MONOCYTES_81 104.3
MONOCYTES_82 103.4
MONOCYTES_83 102.9
MONOCYTES_84 102.5
MONOCYTES_85 102.4
MONOCYTES_86 101.3
MONOCYTES_87 99.8
MONOCYTES_88 99.5
MONOCYTES_89 96.0
MONOCYTES_90 88.9
MONOCYTES_91 85.6
Show allShow less
Non-classical monocyte
TPM: 271.1
Samples: 90

Max TPM: 591.7
Min TPM: 181.1
M2_1 591.7
M2_2 424.8
M2_3 392.4
M2_4 389.3
M2_5 384.0
M2_6 383.5
M2_7 377.9
M2_8 377.8
M2_9 361.8
M2_10 353.7
M2_11 346.8
M2_12 343.3
M2_13 338.0
M2_14 333.3
M2_15 329.1
M2_16 328.7
M2_17 320.6
M2_18 315.9
M2_19 314.2
M2_20 308.8
M2_21 304.6
M2_22 303.7
M2_23 301.3
M2_24 299.4
M2_25 298.5
M2_26 293.7
M2_27 292.6
M2_28 290.2
M2_29 284.2
M2_30 283.1
M2_31 282.3
M2_32 279.4
M2_33 279.2
M2_34 279.0
M2_35 277.1
M2_36 274.5
M2_37 273.5
M2_38 265.0
M2_39 260.7
M2_40 260.5
M2_41 258.5
M2_42 256.3
M2_43 253.5
M2_44 253.3
M2_45 252.5
M2_46 251.8
M2_47 251.0
M2_48 250.1
M2_49 249.4
M2_50 246.0
M2_51 244.6
M2_52 244.6
M2_53 244.3
M2_54 243.8
M2_55 243.3
M2_56 242.7
M2_57 240.4
M2_58 238.3
M2_59 237.5
M2_60 237.4
M2_61 236.7
M2_62 236.1
M2_63 236.1
M2_64 234.0
M2_65 233.9
M2_66 233.9
M2_67 231.7
M2_68 229.8
M2_69 226.7
M2_70 225.5
M2_71 225.2
M2_72 224.8
M2_73 221.3
M2_74 218.1
M2_75 216.2
M2_76 215.2
M2_77 212.2
M2_78 211.5
M2_79 211.2
M2_80 210.7
M2_81 208.9
M2_82 207.9
M2_83 206.2
M2_84 204.7
M2_85 198.0
M2_86 197.4
M2_87 191.3
M2_88 188.7
M2_89 188.2
M2_90 181.1
Show allShow less

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