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  • TISSUE

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  • RAPGEF4
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:35.1 nTPM
HPA Brain:72.5 nTPM
GTEx:35.1 nTPM
Pig:22.2 nTPM
Mouse:65.4 nTPM
Allen mouse:1.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

72.5
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 58.1
2226 Male, age 75, left hemisphere 63.3
1961 Female, age 42, unknown 53.0
Dorsomedial nucleus
nTPM: 72.5
1989 Male, age 62, unknown 131.4
2017 Female, age 42, unknown 44.4
2041 Female, age 72, unknown 41.7
Lateral hypothalamic area
nTPM: 50.9
2412 Male, age 62, unknown 66.2
2271 Male, age 75, both hemispheres 50.1
1791 Male, age 80, right hemisphere 48.0
2228 Male, age 66, unknown 39.3
Mammillary body
nTPM: 40.1
1945 Male, age 80, right hemisphere 69.5
1923 Female, age 72, unknown 35.0
1948 Female, age 72, unknown 35.0
1834 Female, age 42, unknown 33.6
2413 Male, age 66, unknown 27.3
Paraventricular nucleus
nTPM: 46.4
2700 Male, age 62, unknown 46.4
Preoptic area
nTPM: 50.1
1861 Female, age 42, unknown 58.6
2414 Female, age 72, unknown 51.1
1907 Male, age 80, right hemisphere 40.6
Supraoptic nucleus
nTPM: 35.3
2835 Female, age 72, unknown 37.2
2043 Male, age 62, unknown 36.2
1894 Female, age 72, unknown 32.6
Ventromedial nucleus
nTPM: 50.1
1822 Female, age 42, unknown 52.7
1982 Female, age 72, unknown 47.6

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

35.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 35.1
Samples: 257

Max nTPM: 350.7
Min nTPM: 5.1
Std nTPM: 32.6
Median nTPM: 27.3
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 350.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 172.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 158.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 153.5
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 148.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 142.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 138.0
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 135.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 133.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 120.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 112.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 107.2
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 100.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 99.6
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 77.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 74.3
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 71.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 68.3
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 65.3
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 64.3
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 63.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 60.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 59.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 53.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 52.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 51.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 51.1
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 50.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 50.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 50.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 49.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 48.4
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 47.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 46.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 44.8
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 43.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 43.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 42.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 42.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 41.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 41.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 41.9
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 41.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 41.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 40.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 39.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 39.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 39.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 38.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 38.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 38.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 37.4
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 37.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 37.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 37.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 37.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 36.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 36.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 36.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 36.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 35.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 35.3
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 35.2
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 35.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 34.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 34.8
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 34.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 34.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 34.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 34.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 34.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 34.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 34.2
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 34.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 34.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 33.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 33.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 33.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 33.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 33.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 33.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 33.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 32.9
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 32.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 32.8
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 32.6
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 32.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 32.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 32.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 31.6
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 31.6
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 31.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 31.6
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 31.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 31.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 31.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 31.3
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 31.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 31.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 30.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 30.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 30.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 30.2
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 30.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 29.9
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 29.7
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 29.6
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 29.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 29.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 29.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 29.0
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 29.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 29.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 28.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 28.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 28.3
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 28.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 28.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 28.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 28.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 28.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 28.2
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 28.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 27.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 27.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 27.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 27.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 27.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 27.3
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 27.2
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 27.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 27.0
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 26.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 26.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 26.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 26.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 26.3
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 26.3
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 26.3
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 26.2
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 26.1
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 26.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 25.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 25.9
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 25.7
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 25.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 25.6
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 25.5
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 25.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 25.3
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 25.3
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 25.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 25.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 25.1
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 24.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 24.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 24.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 24.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 24.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 24.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 24.4
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 24.3
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 24.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 24.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 24.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 23.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 23.3
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 23.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 22.9
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 22.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 22.8
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 22.6
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 22.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 22.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 22.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 22.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 22.3
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 22.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 22.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 22.2
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 22.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 22.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 22.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 21.7
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 21.6
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 21.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 21.5
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 21.4
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 21.3
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 21.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 21.3
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 21.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 21.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 21.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 21.0
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 20.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 20.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 20.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 20.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 20.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 20.7
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 20.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 20.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 20.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 20.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 20.4
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 20.1
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 20.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 19.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 19.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 19.5
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 19.4
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 19.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 18.8
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 18.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 18.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 18.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 18.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 18.1
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 18.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 18.0
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 17.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 17.5
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 17.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 17.2
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 17.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 17.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 16.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 16.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 16.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 16.6
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 16.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 16.1
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 15.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 15.1
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 15.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 15.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 15.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 14.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 14.5
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 14.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 14.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 14.1
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 13.8
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 13.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 13.6
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 13.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 12.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 12.6
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 12.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 11.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 11.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 11.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 10.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 8.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 8.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 5.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

22.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 22.3
Samples: 4

Max nTPM: 28.1
Min nTPM: 18.4
Sample A Female 28.1
Sample B Female 21.9
Sample C Male 20.6
Sample D Male 18.4

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

65.4
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 65.4
Samples: 4

Max nTPM: 71.5
Min nTPM: 51.5
Sample A Male 51.5
Sample B Male 67.0
Sample C Female 71.5
Sample D Female 71.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.7
69817952 Antisense, RP_050510_04_B01, Mouse strain C57BL/6J (56 days, male) 1.9
74749895 Antisense, RP_060220_04_F01, Mouse strain C57BL/6J (56 days, male) 1.6

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