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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • TF
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN72 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM9 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE14 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS
MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX
SEPTUM SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:201.1 nTPM
GTEx:105.7 nTPM
FANTOM5:177.7 Scaled Tags Per Million
Macaque:176.9 nTPM
Pig:344.8 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

201.1
Sample id Sample description nTPM
Putamen
nTPM: 201.1
2482 Female, age 94, left hemisphere 299.5
1829 Male, age 74, unknown 260.7
1937 Female, age 91, right hemisphere 233.3
2466 Female, age 79, unknown 198.5
2647 Male, age 75, left hemisphere 179.6
2489 Female, age 72, unknown 166.6
1838 Male, age 80, right hemisphere 69.1

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

105.7
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 105.7
Samples: 254

Max nTPM: 694.1
Min nTPM: 9.7
Std nTPM: 68.6
Median nTPM: 91.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 694.1
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 326.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 311.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 296.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 276.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 267.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 264.7
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 238.8
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 233.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 228.8
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 228.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 227.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 213.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 212.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 209.9
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 206.3
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 200.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 197.8
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 191.5
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 190.3
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 190.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 187.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 184.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 184.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 183.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 181.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 178.5
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 175.3
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 174.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 172.9
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 172.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 171.9
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 171.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 169.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 168.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 168.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 164.4
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 163.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 163.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 162.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 157.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 157.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 156.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 155.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 154.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 154.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 154.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 154.4
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 153.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 150.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 149.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 147.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 147.1
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 146.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 145.9
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 144.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 143.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 143.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 143.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 142.5
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 139.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 138.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 138.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 138.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 137.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 136.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 136.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 135.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 134.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 134.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 130.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 130.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 129.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 129.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 127.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 126.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 125.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 125.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 124.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 123.2
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 123.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 122.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 121.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 120.8
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 120.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 120.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 120.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 118.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 118.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 118.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 117.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 116.9
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 116.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 116.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 115.8
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 114.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 114.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 114.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 113.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 112.8
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 112.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 111.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 111.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 110.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 109.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 109.2
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 109.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 108.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 107.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 106.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 104.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 103.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 103.6
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 101.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 101.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 100.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 99.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 99.2
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 97.8
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 97.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 96.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 96.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 95.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 95.3
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 94.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 92.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 92.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 91.6
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 91.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 90.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 89.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 89.6
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 88.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 87.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 86.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 85.0
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 83.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 83.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 83.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 83.2
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 83.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 81.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 81.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 80.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 78.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 78.2
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 76.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 76.7
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 75.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 75.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 75.1
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 74.5
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 73.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 73.6
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 73.5
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 72.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 72.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 72.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 71.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 71.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 71.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 71.6
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 71.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 70.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 70.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 70.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 70.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 69.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 69.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 69.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 69.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 68.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 68.6
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 68.5
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 68.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 66.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 66.0
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 65.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 65.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 64.8
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 64.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 64.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 63.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 63.7
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 63.6
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 62.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 62.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 62.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 62.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 61.3
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 61.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 61.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 61.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 60.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 60.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 60.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 60.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 58.3
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 57.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 57.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 56.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 55.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 55.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 54.9
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 54.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 53.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 53.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 51.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 51.5
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 50.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 50.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 49.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 48.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 48.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 47.5
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 47.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 47.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 46.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 46.1
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 44.8
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 44.7
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 44.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 42.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 41.8
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 40.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 40.1
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 40.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 40.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 39.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 38.5
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 38.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 37.3
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 36.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 35.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 34.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 33.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 33.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 33.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 33.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 31.8
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 31.5
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 31.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 31.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 30.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 29.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 28.0
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 27.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 26.7
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 25.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 24.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 20.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 19.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 19.7
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 9.7
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

177.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 177.7
FF:10176-103C5 60 years, female 177.7

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

176.9
Macaque sample Sample description nTPM
Putamen
nTPM: 176.9
Samples: 2

Max nTPM: 200.6
Min nTPM: 153.2
Sample A 153.2
Sample B 200.6

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

344.8
Pig sample Sample description nTPM
Putamen
nTPM: 344.8
Samples: 3

Max nTPM: 510.2
Min nTPM: 204.3
Sample B Female 204.3
Sample C Male 320.0
Sample D Male 510.2

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