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  • SUMMARY

  • TISSUE

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  • ARCN1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:49.3 nTPM
HPA Brain:61.4 nTPM
GTEx:49.3 nTPM
Pig:54.3 nTPM
Mouse:77.0 nTPM
Allen mouse:2.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

61.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 59.8
2226 Male, age 75, left hemisphere 68.3
1961 Female, age 42, unknown 51.3
Dorsomedial nucleus
nTPM: 51.4
2041 Female, age 72, unknown 55.4
1989 Male, age 62, unknown 50.1
2017 Female, age 42, unknown 48.7
Lateral hypothalamic area
nTPM: 61.2
2228 Male, age 66, unknown 67.3
2271 Male, age 75, both hemispheres 64.7
1791 Male, age 80, right hemisphere 63.2
2412 Male, age 62, unknown 49.5
Mammillary body
nTPM: 58.7
1923 Female, age 72, unknown 65.8
1948 Female, age 72, unknown 58.7
2413 Male, age 66, unknown 57.1
1834 Female, age 42, unknown 56.8
1945 Male, age 80, right hemisphere 55.2
Paraventricular nucleus
nTPM: 58.8
2700 Male, age 62, unknown 58.8
Preoptic area
nTPM: 54.2
1907 Male, age 80, right hemisphere 55.2
2414 Female, age 72, unknown 54.2
1861 Female, age 42, unknown 53.2
Supraoptic nucleus
nTPM: 61.4
2835 Female, age 72, unknown 62.7
2043 Male, age 62, unknown 61.5
1894 Female, age 72, unknown 59.9
Ventromedial nucleus
nTPM: 53.9
1982 Female, age 72, unknown 56.3
1822 Female, age 42, unknown 51.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

49.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 49.3
Samples: 257

Max nTPM: 76.3
Min nTPM: 35.5
Std nTPM: 6.9
Median nTPM: 48.8
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 76.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 73.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 72.0
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 71.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 68.0
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 67.5
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 67.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 65.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 62.7
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 62.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 62.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 61.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 61.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 61.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 60.5
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 60.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 60.0
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 59.8
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 59.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 59.5
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 59.4
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 59.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 59.0
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 58.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 58.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 58.4
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 58.4
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 58.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 58.2
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 57.7
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 57.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 57.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 57.1
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 57.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 56.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 56.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 56.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 55.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 55.7
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 55.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 55.5
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 55.0
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 55.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 54.9
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 54.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 54.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 54.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 54.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 54.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 54.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 54.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 54.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 54.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 54.3
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 53.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 53.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 53.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 53.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 53.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 53.5
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 53.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 53.3
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 53.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 53.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 53.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 52.9
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 52.9
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 52.9
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 52.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 52.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 52.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 52.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 52.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 52.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 51.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 51.9
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 51.8
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 51.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 51.8
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 51.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 51.7
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 51.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 51.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 51.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 51.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 51.5
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 51.4
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 51.3
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 51.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 51.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 51.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 51.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 51.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 51.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 51.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 51.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 50.8
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 50.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 50.6
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 50.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 50.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 50.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 50.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 50.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 50.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 50.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 50.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 50.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 49.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 49.9
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 49.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 49.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 49.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 49.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 49.8
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 49.8
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 49.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 49.6
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 49.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 49.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 49.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 49.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 49.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 49.3
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 49.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 49.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 48.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 48.9
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 48.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 48.8
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 48.8
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 48.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 48.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 48.5
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 48.5
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 48.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 48.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 48.2
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 48.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 48.1
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 48.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 48.1
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 47.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 47.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 47.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 47.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 47.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 47.5
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 47.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 47.4
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 47.3
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 47.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 47.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 47.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 47.0
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 46.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 46.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 46.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 46.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 46.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 46.5
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 46.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 46.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 46.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 46.2
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 46.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 46.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 46.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 46.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 45.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 45.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 45.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 45.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 45.9
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 45.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 45.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 45.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 45.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 45.3
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 45.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 45.2
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 45.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 45.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 45.1
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 44.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 44.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 44.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 44.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 44.6
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 44.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 44.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 44.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 44.3
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 44.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 44.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 44.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 44.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 44.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 44.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 43.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 43.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 43.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 43.7
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 43.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 43.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 43.6
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 43.6
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 43.6
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 43.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 43.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 43.3
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 43.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 43.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 43.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 43.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 43.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 43.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 43.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 43.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 42.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 42.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 42.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 42.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 42.1
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 42.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 41.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 41.9
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 41.8
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 41.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 41.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 41.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 41.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 41.2
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 41.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 41.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 40.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 40.7
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 40.3
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 40.2
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 39.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 39.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 39.7
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 39.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 39.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 39.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 39.1
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 38.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 38.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 38.7
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 38.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 38.1
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 37.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 37.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 37.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 37.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 36.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 35.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

54.3
Pig sample Sample description nTPM
Hypothalamus
nTPM: 54.3
Samples: 4

Max nTPM: 64.8
Min nTPM: 47.1
Sample A Female 64.8
Sample B Female 54.6
Sample C Male 50.6
Sample D Male 47.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

77.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 77.0
Samples: 4

Max nTPM: 82.5
Min nTPM: 73.9
Sample A Male 73.9
Sample B Male 76.6
Sample C Female 82.5
Sample D Female 75.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 2.5
583567 Antisense, RP_040831_02_C09, Mouse strain C57BL/6J (56 days, male) 2.5

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