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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:61.4 nTPM
HPA Brain:362.0 nTPM
GTEx:61.4 nTPM
Pig:34.4 nTPM
Mouse:73.0 nTPM
Allen mouse:0.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

362.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 175.5
1961 Female, age 42, unknown 178.7
2226 Male, age 75, left hemisphere 172.3
Dorsomedial nucleus
nTPM: 192.2
2017 Female, age 42, unknown 203.0
1989 Male, age 62, unknown 191.6
2041 Female, age 72, unknown 181.9
Lateral hypothalamic area
nTPM: 196.7
1791 Male, age 80, right hemisphere 241.9
2271 Male, age 75, both hemispheres 212.5
2412 Male, age 62, unknown 203.9
2228 Male, age 66, unknown 128.3
Mammillary body
nTPM: 186.5
1834 Female, age 42, unknown 301.8
1945 Male, age 80, right hemisphere 191.6
1948 Female, age 72, unknown 152.5
2413 Male, age 66, unknown 152.5
1923 Female, age 72, unknown 134.1
Paraventricular nucleus
nTPM: 196.0
2700 Male, age 62, unknown 196.0
Preoptic area
nTPM: 184.6
1907 Male, age 80, right hemisphere 200.6
1861 Female, age 42, unknown 179.9
2414 Female, age 72, unknown 173.2
Supraoptic nucleus
nTPM: 362.0
2043 Male, age 62, unknown 477.0
1894 Female, age 72, unknown 399.0
2835 Female, age 72, unknown 209.9
Ventromedial nucleus
nTPM: 171.1
1822 Female, age 42, unknown 202.7
1982 Female, age 72, unknown 139.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

61.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 61.4
Samples: 257

Max nTPM: 205.1
Min nTPM: 23.1
Std nTPM: 27.2
Median nTPM: 54.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 205.1
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 149.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 140.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 137.8
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 136.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 123.7
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 121.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 119.5
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 116.1
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 115.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 113.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 112.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 110.1
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 109.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 108.8
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 108.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 108.1
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 108.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 108.0
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 107.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 107.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 105.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 105.6
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 105.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 104.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 102.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 101.4
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 100.9
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 99.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 99.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 99.2
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 97.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 95.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 95.4
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 95.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 95.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 94.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 93.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 93.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 92.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 91.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 90.3
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 89.5
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 88.6
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 87.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 86.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 86.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 85.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 85.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 83.9
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 82.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 82.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 81.7
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 81.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 81.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 81.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 81.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 80.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 80.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 79.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 79.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 77.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 76.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 75.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 75.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 74.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 74.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 73.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 73.5
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 73.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 71.7
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 71.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 71.1
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 71.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 71.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 70.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 70.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 69.5
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 68.1
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 67.4
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 67.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 66.7
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 66.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 65.4
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 65.3
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 65.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 64.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 64.6
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 64.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 64.5
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 63.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 63.7
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 63.4
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 63.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 62.7
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 62.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 62.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 61.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 61.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 60.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 60.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 60.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 60.0
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 59.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 59.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 59.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 59.5
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 58.9
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 58.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 58.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 58.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 58.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 58.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 58.3
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 57.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 57.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 56.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 56.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 56.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 56.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 56.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 56.1
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 55.3
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 55.3
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 55.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 55.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 54.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 54.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 54.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 54.0
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 53.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 53.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 53.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 52.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 52.4
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 52.1
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 51.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 51.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 51.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 51.2
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 50.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 50.6
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 50.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 49.7
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 49.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 49.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 49.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 49.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 49.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 49.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 48.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 48.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 48.7
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 48.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 48.4
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 48.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 48.1
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 48.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 48.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 47.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 47.0
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 46.9
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 46.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 46.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 46.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 46.4
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 46.3
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 46.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 45.7
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 45.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 45.4
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 45.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 45.2
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 45.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 45.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 45.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 45.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 45.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 44.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 44.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 44.7
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 44.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 44.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 44.5
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 44.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 44.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 44.1
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 44.1
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 43.8
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 43.8
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 43.4
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 43.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 43.1
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 43.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 42.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 42.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 42.2
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 42.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 41.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 41.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 41.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 41.1
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 41.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 40.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 40.6
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 40.1
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 39.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 39.8
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 39.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 39.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 39.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 39.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 38.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 38.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 38.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 38.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 38.2
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 37.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 37.6
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 37.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 37.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 37.1
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 36.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 36.3
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 36.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 35.9
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 35.8
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 35.6
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 35.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 33.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 33.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 33.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 32.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 32.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 32.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 32.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 31.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 30.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 30.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 30.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 29.8
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 29.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 29.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 28.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 28.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 28.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 27.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 26.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 25.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 25.5
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 25.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 25.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 24.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 23.4
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 23.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 23.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 23.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

34.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 34.5
Samples: 4

Max nTPM: 39.9
Min nTPM: 27.6
Sample A Female 27.6
Sample B Female 39.9
Sample C Male 31.8
Sample D Male 38.5

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

73.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 73.0
Samples: 4

Max nTPM: 78.4
Min nTPM: 66.5
Sample A Male 70.2
Sample B Male 66.5
Sample C Female 76.8
Sample D Female 78.4

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.6
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.6
69169391 Antisense, RP_050321_03_E01, Mouse strain C57BL/6J (56 days, male) 1.2
71213156 Antisense, RP_050816_03_H12, Mouse strain C57BL/6J (56 days, male) 0.4
74425572 Antisense, RP_051214_02_H12, Mouse strain C57BL/6J (56 days, male) 0.2

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