HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:486.8 nTPM
HPA Brain:748.6 nTPM
GTEx:486.8 nTPM
FANTOM5:1798.3 Scaled Tags Per Million
Pig:651.5 nTPM
Mouse:1525.8 nTPM
Allen mouse:27.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA072606Antibody HPA074351Antibody CAB005230
Glial cells Not detectedNot detectedMedium
Neuronal cells LowLowMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 748.6
Sample id Sample description nTPM
Hippocampus
nTPM: 595.8
1898 Male, age 80, left hemisphere 758.8
2529 Female, age 94, left hemisphere 618.3
2621 Female, age 67, right hemisphere 609.4
1855 Male, age 76, left hemisphere 607.9
1911 Female, age 85, right hemisphere 506.4
2148 Female, age 91, left hemisphere 474.2
Dentate gyrus
nTPM: 601.5
2010 Male, age 76, both hemispheres 759.8
1927 Female, age 91, both hemispheres 691.7
2530 Female, age 94, left hemisphere 634.7
2246 Female, age 85, both hemispheres 559.1
2528 Male, age 74, both hemispheres 503.0
2531 Female, age 67, both hemispheres 460.8
Entorhinal gyrus
nTPM: 585.6
1938 Female, age 85, left hemisphere 769.5
2764 Male, age 80, right hemisphere 710.7
1787 Male, age 76, left hemisphere 640.2
2686 Male, age 75, right hemisphere 489.5
2117 Female, age 91, right hemisphere 482.2
2613 Female, age 94, left hemisphere 421.7
Hippocampus, CA1
nTPM: 677.2
2749 Male, age 80, left hemisphere 1010.0
1873 Female, age 85, both hemispheres 668.1
2045 Male, age 76, both hemispheres 630.8
2527 Male, age 74, both hemispheres 548.7
2082 Female, age 91, right hemisphere 528.3
Hippocampus, CA2
nTPM: 646.9
1892 Male, age 76, both hemispheres 933.7
1963 Male, age 80, left hemisphere 735.7
2249 Male, age 74, both hemispheres 607.3
1940 Female, age 85, left hemisphere 563.8
2437 Female, age 94, left hemisphere 531.9
2113 Female, age 91, right hemisphere 509.1
Hippocampus, CA3
nTPM: 600.4
2137 Male, age 80, left hemisphere 821.1
1867 Male, age 76, both hemispheres 762.2
2436 Male, age 74, both hemispheres 626.7
1891 Female, age 85, both hemispheres 524.0
2861 Female, age 67, both hemispheres 457.3
2620 Female, age 94, left hemisphere 411.0
Parahippocampal cortex
nTPM: 616.8
1850 Male, age 80, both hemispheres 817.2
1933 Female, age 85, both hemispheres 710.0
1990 Female, age 91, right hemisphere 670.9
2250 Female, age 67, right hemisphere 669.3
2532 Female, age 72, left hemisphere 649.7
2245 Female, age 91, both hemispheres 639.0
2018 Male, age 76, both hemispheres 635.3
2622 Female, age 67, right hemisphere 475.1
2692 Male, age 74, both hemispheres 469.1
2693 Female, age 94, both hemispheres 432.0
Perirhinal gyrus
nTPM: 748.6
1847 Female, age 91, left hemisphere 951.7
1841 Female, age 85, right hemisphere 829.2
1794 Male, age 80, right hemisphere 774.7
2848 Male, age 76, right hemisphere 673.6
2521 Female, age 94, right hemisphere 513.8
Subiculum
nTPM: 580.9
1977 Female, age 85, both hemispheres 695.2
1901 Male, age 80, both hemispheres 678.3
2042 Male, age 76, both hemispheres 619.2
2438 Female, age 94, left hemisphere 584.9
2619 Male, age 74, both hemispheres 476.7
2729 Female, age 91, right hemisphere 431.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 486.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 486.8
Samples: 255

Max nTPM: 2505.3
Min nTPM: 200.1
Std nTPM: 212.9
Median nTPM: 442.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 2505.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 1447.2
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 1126.6
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 1112.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 1016.8
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 931.2
GTEX-1N2EF-0011-R1a-SM-F2TAT 60-69 years, male 879.9
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 858.4
GTEX-1JMQL-0011-R1a-SM-F3K4U 50-59 years, female 851.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 844.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 841.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1798.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1798.3
FF:10169-103B7 60 years, female 2241.2
FF:10153-102I9 76 years, female 1355.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 651.5
Pig sample Sample description nTPM
Subiculum
nTPM: 624.9
Samples: 4

Max nTPM: 745.6
Min nTPM: 571.4
Sample A Female 745.6
Sample B Female 590.2
Sample C Male 592.3
Sample D Male 571.4
Dorsal hippocampus
nTPM: 651.5
Samples: 4

Max nTPM: 810.8
Min nTPM: 480.6
Sample A Female 810.8
Sample B Female 694.7
Sample C Male 619.7
Sample D Male 480.6
Entorhinal cortex
nTPM: 600.5
Samples: 4

Max nTPM: 638.1
Min nTPM: 532.9
Sample A Female 638.1
Sample B Female 602.8
Sample C Male 628.3
Sample D Male 532.9
Ventral hippocampus
nTPM: 625.1
Samples: 4

Max nTPM: 734.1
Min nTPM: 476.4
Sample A Female 682.2
Sample B Female 476.4
Sample C Male 734.1
Sample D Male 607.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 1525.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1318.4
Samples: 4

Max nTPM: 1481.9
Min nTPM: 1205.8
Sample A Male 1205.8
Sample B Male 1240.7
Sample C Female 1345.0
Sample D Female 1481.9
Hippocampal formation
nTPM: 1525.8
Samples: 4

Max nTPM: 1649.1
Min nTPM: 1450.6
Sample A Male 1486.4
Sample B Male 1517.0
Sample C Female 1649.1
Sample D Female 1450.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 27.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 27.2
69735168 Antisense, RP_050503_02_C01, Mouse strain C57BL/6J (56 days, male) 27.2

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