HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:1092.8 nTPM
HPA Brain:457.4 nTPM
GTEx:1092.8 nTPM
FANTOM5:105.6 Scaled Tags Per Million
Pig:256.1 nTPM
Mouse:939.0 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003365Antibody HPA055361
Glial cells Not detectedNot detected
Neuronal cells HighLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 457.4
Sample id Sample description nTPM
Hippocampus
nTPM: 446.8
2529 Female, age 94, left hemisphere 504.1
1898 Male, age 80, left hemisphere 482.3
2148 Female, age 91, left hemisphere 455.9
2621 Female, age 67, right hemisphere 440.6
1855 Male, age 76, left hemisphere 411.3
1911 Female, age 85, right hemisphere 386.5
Dentate gyrus
nTPM: 457.4
2530 Female, age 94, left hemisphere 613.5
2531 Female, age 67, both hemispheres 482.1
2010 Male, age 76, both hemispheres 453.4
2528 Male, age 74, both hemispheres 419.7
1927 Female, age 91, both hemispheres 394.8
2246 Female, age 85, both hemispheres 380.8
Entorhinal gyrus
nTPM: 448.8
2686 Male, age 75, right hemisphere 513.9
2117 Female, age 91, right hemisphere 481.6
2764 Male, age 80, right hemisphere 472.4
1787 Male, age 76, left hemisphere 430.5
2613 Female, age 94, left hemisphere 398.2
1938 Female, age 85, left hemisphere 396.1
Hippocampus, CA1
nTPM: 428.9
2082 Female, age 91, right hemisphere 468.0
2045 Male, age 76, both hemispheres 452.2
2749 Male, age 80, left hemisphere 425.1
1873 Female, age 85, both hemispheres 406.7
2527 Male, age 74, both hemispheres 392.3
Hippocampus, CA2
nTPM: 445.7
1963 Male, age 80, left hemisphere 507.1
2113 Female, age 91, right hemisphere 462.6
2437 Female, age 94, left hemisphere 459.5
1892 Male, age 76, both hemispheres 450.0
1940 Female, age 85, left hemisphere 403.1
2249 Male, age 74, both hemispheres 391.9
Hippocampus, CA3
nTPM: 428.7
2861 Female, age 67, both hemispheres 490.5
1867 Male, age 76, both hemispheres 482.3
2436 Male, age 74, both hemispheres 448.6
1891 Female, age 85, both hemispheres 405.0
2137 Male, age 80, left hemisphere 400.5
2620 Female, age 94, left hemisphere 345.3
Parahippocampal cortex
nTPM: 390.8
2018 Male, age 76, both hemispheres 464.8
1990 Female, age 91, right hemisphere 412.2
1850 Male, age 80, both hemispheres 411.3
2532 Female, age 72, left hemisphere 410.5
2245 Female, age 91, both hemispheres 397.7
1933 Female, age 85, both hemispheres 394.6
2250 Female, age 67, right hemisphere 392.2
2622 Female, age 67, right hemisphere 359.5
2692 Male, age 74, both hemispheres 352.2
2693 Female, age 94, both hemispheres 313.2
Perirhinal gyrus
nTPM: 416.0
1841 Female, age 85, right hemisphere 441.4
1847 Female, age 91, left hemisphere 440.0
1794 Male, age 80, right hemisphere 436.1
2848 Male, age 76, right hemisphere 382.8
2521 Female, age 94, right hemisphere 379.5
Subiculum
nTPM: 414.4
1977 Female, age 85, both hemispheres 452.8
2042 Male, age 76, both hemispheres 430.2
2729 Female, age 91, right hemisphere 430.1
1901 Male, age 80, both hemispheres 403.3
2438 Female, age 94, left hemisphere 392.2
2619 Male, age 74, both hemispheres 377.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 1092.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1092.8
Samples: 255

Max nTPM: 2342.4
Min nTPM: 620.1
Std nTPM: 291.1
Median nTPM: 1031.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 2342.4
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 2241.2
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 2223.3
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 2141.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2085.2
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 1889.3
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 1799.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 1792.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 1634.9
GTEX-13PLJ-0011-R1a-SM-GJ3QF 60-69 years, female 1611.3
GTEX-1PWST-0011-R1b-SM-F2I38 70-79 years, male 1609.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 105.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 105.6
FF:10169-103B7 60 years, female 152.6
FF:10153-102I9 76 years, female 58.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 256.1
Pig sample Sample description nTPM
Subiculum
nTPM: 237.5
Samples: 4

Max nTPM: 302.4
Min nTPM: 199.0
Sample A Female 302.4
Sample B Female 244.5
Sample C Male 199.0
Sample D Male 203.9
Dorsal hippocampus
nTPM: 256.1
Samples: 4

Max nTPM: 300.3
Min nTPM: 195.6
Sample A Female 300.3
Sample B Female 258.0
Sample C Male 270.4
Sample D Male 195.6
Entorhinal cortex
nTPM: 233.0
Samples: 4

Max nTPM: 314.6
Min nTPM: 173.4
Sample A Female 206.8
Sample B Female 314.6
Sample C Male 237.3
Sample D Male 173.4
Ventral hippocampus
nTPM: 227.3
Samples: 4

Max nTPM: 259.3
Min nTPM: 206.8
Sample A Female 206.8
Sample B Female 216.6
Sample C Male 259.3
Sample D Male 226.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 939.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 882.9
Samples: 4

Max nTPM: 926.5
Min nTPM: 836.4
Sample A Male 867.6
Sample B Male 836.4
Sample C Female 926.5
Sample D Female 901.0
Hippocampal formation
nTPM: 939.1
Samples: 4

Max nTPM: 1086.8
Min nTPM: 882.6
Sample A Male 1086.8
Sample B Male 887.8
Sample C Female 899.0
Sample D Female 882.6

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