We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RPL3
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • RPL3
BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Brain methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1461.7 nTPM
HPA Brain:806.8 nTPM
GTEx:1461.7 nTPM
FANTOM5:86.7 Scaled Tags Per Million
Pig:371.5 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

806.8
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 633.0
2565 Male, age 75, midline 732.6
1981 Female, age 72, midline 697.6
2194 Female, age 79, both hemispheres 642.6
2816 Male, age 47, midline 557.0
2048 Male, age 55, midline 535.0
Cervical spinal cord, dorsal horn
nTPM: 550.2
2173 Female, age 72, unknown 752.6
2296 Male, age 66, both hemispheres 612.2
2069 Male, age 47, both hemispheres 610.5
1877 Male, age 55, unknown 541.0
2721 Male, age 90, both hemispheres 417.1
2297 Male, age 75, both hemispheres 367.8
Cervical spinal cord, ventral horn
nTPM: 806.8
2480 Male, age 75, both hemispheres 1081.1
2809 Male, age 90, both hemispheres 1015.7
2098 Female, age 72, unknown 795.6
2295 Male, age 66, both hemispheres 772.9
2068 Male, age 55, unknown 655.9
2820 Female, age 79, both hemispheres 519.4

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1461.7
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 1461.7
Samples: 204

Max nTPM: 3113.2
Min nTPM: 637.5
Std nTPM: 392.7
Median nTPM: 1397.2
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 3113.2
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 2550.4
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 2447.3
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 2443.0
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 2371.2
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 2309.8
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 2279.3
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 2267.0
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 2256.4
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 2250.0
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 2246.4
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 2150.6
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 2139.1
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 2090.8
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 2061.5
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 2060.9
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 2050.3
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 2031.1
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 2015.2
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 2012.3
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 2000.3
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 1991.3
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 1989.4
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 1977.9
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 1975.5
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 1959.1
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 1948.0
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 1940.4
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 1917.6
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 1871.6
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 1870.6
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 1857.0
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 1841.3
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 1839.1
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 1832.0
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 1820.7
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 1811.4
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 1811.4
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 1801.8
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 1800.4
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 1794.1
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 1778.4
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 1774.6
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 1772.4
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 1760.1
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 1749.8
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 1711.8
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 1699.4
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 1691.8
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 1685.3
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 1683.0
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 1678.7
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 1678.4
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 1673.7
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 1672.1
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 1657.0
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 1656.2
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 1655.6
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 1645.8
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 1643.9
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 1633.3
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 1624.1
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 1614.9
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 1606.0
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 1605.7
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 1597.2
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 1592.9
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 1589.5
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 1579.2
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 1575.8
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 1575.4
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 1560.5
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 1545.5
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 1540.6
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 1534.5
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 1525.6
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 1524.1
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 1523.4
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 1520.2
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 1503.7
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 1494.9
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 1485.8
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 1485.1
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 1481.8
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 1474.1
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 1472.1
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 1463.5
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 1462.2
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 1458.5
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 1449.1
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 1445.5
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 1442.5
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 1430.1
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 1428.3
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 1427.2
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 1424.1
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 1411.5
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 1407.1
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 1405.5
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 1402.0
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 1401.6
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 1398.5
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 1396.0
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 1392.6
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 1387.1
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 1385.6
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 1377.1
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 1370.0
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 1362.2
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 1354.0
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 1353.5
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 1346.6
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 1345.7
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 1340.0
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 1327.4
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 1325.0
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 1324.8
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 1322.8
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 1321.8
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 1316.0
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 1312.8
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 1310.8
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 1310.2
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 1308.5
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 1305.8
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 1304.4
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 1304.4
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 1293.6
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 1291.8
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 1289.0
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 1287.4
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 1285.6
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 1283.7
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 1282.8
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 1279.7
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 1278.5
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 1266.9
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 1261.3
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 1256.2
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 1255.8
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 1254.3
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 1245.2
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 1242.8
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 1237.3
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 1223.8
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 1221.1
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 1213.6
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 1196.6
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 1190.2
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 1186.4
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 1183.1
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 1178.1
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 1173.0
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 1167.6
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 1161.5
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 1156.2
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 1155.1
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 1154.7
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 1145.1
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 1138.9
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 1137.4
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 1127.0
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 1125.9
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 1123.9
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 1120.1
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 1113.6
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 1104.3
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 1095.2
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 1094.3
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 1085.7
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 1083.6
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 1083.2
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 1083.2
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 1079.1
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 1077.7
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 1068.2
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 1059.4
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 1057.2
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 1056.9
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 1055.6
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 1054.0
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 1050.5
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 1050.4
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 1037.6
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 1033.7
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 1016.6
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 1012.2
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 1002.5
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 982.4
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 978.0
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 960.9
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 955.4
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 933.5
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 925.3
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 921.1
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 918.3
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 872.8
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 863.9
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 863.1
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 862.9
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 821.0
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 753.2
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 720.0
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 637.5
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

86.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 86.7
FF:10159-103A6 76 years, female 91.0
FF:10181-103D1 60 years, female 82.4

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

371.5
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 371.5
Samples: 4

Max nTPM: 543.7
Min nTPM: 248.8
Sample A Female 248.8
Sample B Female 403.1
Sample C Male 543.7
Sample D Male 290.3
Ventral spinal cord
nTPM: 345.9
Samples: 4

Max nTPM: 393.2
Min nTPM: 266.2
Sample A Female 266.2
Sample B Female 393.2
Sample C Male 393.0
Sample D Male 331.0

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo