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IMMUNE CELL NK-CELLS Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cells
Nk-cells
Immune cell methods
NK-CELLS - Expression summary
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA:13.9 nTPM
Monaco:37.2 nTPM
Schmiedel:21.8 TPM

NK-CELLS - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

13.9
HPA sample nTPM
NK-cell
nTPM: 13.9
Samples: 6

Max nTPM: 18.8
Min nTPM: 9.8
P10809_1013 9.8
P10809_1033 15.0
P10809_1052 13.7
P10809_1071 18.8
P10809_1093 14.0
P10809_1103 11.9

NK-CELLS - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

37.2
Monaco sample nTPM
NK-cell
nTPM: 37.2
Samples: 4

Max nTPM: 49.2
Min nTPM: 25.0
RHH5316_R3683 36.9
RHH5224_R3596 25.0
RHH5253_R3625 49.2
RHH5282_R3654 37.8

NK-CELLS - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max subtype TPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

21.8
Schmiedel sample id TPM
NK-cell
TPM: 21.8
Samples: 90

Max TPM: 30.5
Min TPM: 13.2
NK_1 30.5
NK_2 30.0
NK_3 29.9
NK_4 29.7
NK_5 28.1
NK_6 28.1
NK_7 27.0
NK_8 26.6
NK_9 26.1
NK_10 26.1
NK_11 25.6
NK_12 25.5
NK_13 25.5
NK_14 25.4
NK_15 25.3
NK_16 25.3
NK_17 24.8
NK_18 24.5
NK_19 24.3
NK_20 24.3
NK_21 24.3
NK_22 24.3
NK_23 23.9
NK_24 23.7
NK_25 23.7
NK_26 23.2
NK_27 23.2
NK_28 23.0
NK_29 23.0
NK_30 22.9
NK_31 22.8
NK_32 22.5
NK_33 22.4
NK_34 22.4
NK_35 22.2
NK_36 22.0
NK_37 22.0
NK_38 22.0
NK_39 21.9
NK_40 21.8
NK_41 21.8
NK_42 21.8
NK_43 21.7
NK_44 21.6
NK_45 21.6
NK_46 21.4
NK_47 21.4
NK_48 21.3
NK_49 21.3
NK_50 21.2
NK_51 21.2
NK_52 21.1
NK_53 21.1
NK_54 20.8
NK_55 20.4
NK_56 20.4
NK_57 20.0
NK_58 20.0
NK_59 19.9
NK_60 19.9
NK_61 19.9
NK_62 19.8
NK_63 19.8
NK_64 19.7
NK_65 19.6
NK_66 19.5
NK_67 19.5
NK_68 19.4
NK_69 19.4
NK_70 19.3
NK_71 19.3
NK_72 19.3
NK_73 19.3
NK_74 19.2
NK_75 18.9
NK_76 18.9
NK_77 18.8
NK_78 18.7
NK_79 18.7
NK_80 18.5
NK_81 18.3
NK_82 18.0
NK_83 18.0
NK_84 17.6
NK_85 17.2
NK_86 16.8
NK_87 16.3
NK_88 15.8
NK_89 15.8
NK_90 13.2
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