A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
29.0
nTPM
Monaco:
117.1
nTPM
Schmiedel:
98.4
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
29.0
HPA sample
nTPM
Classical monocyte nTPM: 22.5
Samples: 6
Max nTPM: 27.8
Min nTPM: 18.2
P10809_1003
27.8
P10809_1020
25.1
P10809_1039
24.2
P10809_1058
19.6
P10809_1080
19.9
P10809_1107
18.2
Intermediate monocyte nTPM: 16.2
Samples: 6
Max nTPM: 27.0
Min nTPM: 9.0
P10809_1004
27.0
P10809_1023
18.5
P10809_1042
16.8
P10809_1061
13.1
P10809_1081
9.0
P10809_1108
12.8
Non-classical monocyte nTPM: 29.0
Samples: 5
Max nTPM: 64.0
Min nTPM: 17.7
P10809_1005
25.8
P10809_1053
18.8
P10809_1072
64.0
P10809_1082
17.7
P10809_1109
18.7
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
117.1
Monaco sample
nTPM
Classical monocyte nTPM: 117.1
Samples: 4
Max nTPM: 138.4
Min nTPM: 90.2
RHH5313_R3680
90.2
RHH5221_R3593
126.9
RHH5250_R3622
138.4
RHH5279_R3651
112.8
Intermediate monocyte nTPM: 88.7
Samples: 4
Max nTPM: 130.2
Min nTPM: 59.7
RHH5314_R3681
78.6
RHH5222_R3594
130.2
RHH5251_R3623
86.4
RHH5280_R3652
59.7
Non-classical monocyte nTPM: 112.9
Samples: 4
Max nTPM: 147.6
Min nTPM: 91.9
RHH5315_R3682
98.9
RHH5223_R3595
147.6
RHH5252_R3624
113.0
RHH5281_R3653
91.9
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
98.4
Schmiedel sample id
TPM
Classical monocyte TPM: 79.5
Samples: 91
Max TPM: 111.5
Min TPM: 51.5
MONOCYTES_1
111.5
MONOCYTES_2
111.0
MONOCYTES_3
110.9
MONOCYTES_4
109.9
MONOCYTES_5
104.5
MONOCYTES_6
104.4
MONOCYTES_7
99.5
MONOCYTES_8
99.2
MONOCYTES_9
98.1
MONOCYTES_10
97.7
MONOCYTES_11
96.8
MONOCYTES_12
96.5
MONOCYTES_13
95.9
MONOCYTES_14
95.0
MONOCYTES_15
95.0
MONOCYTES_16
94.7
MONOCYTES_17
94.5
MONOCYTES_18
94.5
MONOCYTES_19
93.5
MONOCYTES_20
91.5
MONOCYTES_21
90.6
MONOCYTES_22
89.5
MONOCYTES_23
89.1
MONOCYTES_24
88.2
MONOCYTES_25
87.6
MONOCYTES_26
87.2
MONOCYTES_27
86.5
MONOCYTES_28
86.1
MONOCYTES_29
85.2
MONOCYTES_30
85.2
MONOCYTES_31
84.5
MONOCYTES_32
84.3
MONOCYTES_33
83.8
MONOCYTES_34
82.7
MONOCYTES_35
82.2
MONOCYTES_36
81.8
MONOCYTES_37
81.8
MONOCYTES_38
81.3
MONOCYTES_39
81.0
MONOCYTES_40
80.5
MONOCYTES_41
80.1
MONOCYTES_42
80.1
MONOCYTES_43
79.6
MONOCYTES_44
78.5
MONOCYTES_45
77.2
MONOCYTES_46
76.4
MONOCYTES_47
76.1
MONOCYTES_48
76.0
MONOCYTES_49
76.0
MONOCYTES_50
76.0
MONOCYTES_51
75.8
MONOCYTES_52
75.6
MONOCYTES_53
75.5
MONOCYTES_54
74.9
MONOCYTES_55
74.9
MONOCYTES_56
74.9
MONOCYTES_57
74.6
MONOCYTES_58
74.5
MONOCYTES_59
74.5
MONOCYTES_60
74.5
MONOCYTES_61
74.3
MONOCYTES_62
73.6
MONOCYTES_63
73.1
MONOCYTES_64
73.0
MONOCYTES_65
72.6
MONOCYTES_66
71.8
MONOCYTES_67
71.0
MONOCYTES_68
70.9
MONOCYTES_69
70.7
MONOCYTES_70
70.3
MONOCYTES_71
69.1
MONOCYTES_72
69.0
MONOCYTES_73
68.9
MONOCYTES_74
68.6
MONOCYTES_75
68.0
MONOCYTES_76
67.7
MONOCYTES_77
65.7
MONOCYTES_78
65.4
MONOCYTES_79
65.2
MONOCYTES_80
63.2
MONOCYTES_81
61.3
MONOCYTES_82
60.2
MONOCYTES_83
60.2
MONOCYTES_84
59.7
MONOCYTES_85
59.3
MONOCYTES_86
57.1
MONOCYTES_87
56.7
MONOCYTES_88
54.0
MONOCYTES_89
53.8
MONOCYTES_90
52.9
MONOCYTES_91
51.5
Show allShow less
Non-classical monocyte TPM: 98.4
Samples: 90
Max TPM: 134.4
Min TPM: 68.7
M2_1
134.4
M2_2
133.6
M2_3
130.4
M2_4
129.9
M2_5
126.4
M2_6
125.7
M2_7
123.9
M2_8
123.5
M2_9
123.1
M2_10
122.5
M2_11
122.4
M2_12
122.3
M2_13
118.4
M2_14
115.7
M2_15
115.4
M2_16
115.4
M2_17
115.3
M2_18
115.2
M2_19
115.1
M2_20
110.6
M2_21
109.5
M2_22
108.4
M2_23
108.4
M2_24
106.6
M2_25
106.2
M2_26
105.9
M2_27
105.8
M2_28
105.3
M2_29
105.1
M2_30
104.4
M2_31
104.0
M2_32
102.8
M2_33
102.2
M2_34
102.1
M2_35
102.0
M2_36
101.3
M2_37
101.3
M2_38
101.2
M2_39
100.7
M2_40
100.3
M2_41
99.9
M2_42
99.7
M2_43
98.3
M2_44
97.3
M2_45
97.3
M2_46
97.0
M2_47
97.0
M2_48
96.5
M2_49
95.9
M2_50
95.7
M2_51
94.3
M2_52
94.3
M2_53
92.4
M2_54
90.9
M2_55
90.7
M2_56
90.6
M2_57
90.6
M2_58
90.5
M2_59
90.2
M2_60
89.6
M2_61
88.8
M2_62
88.1
M2_63
88.1
M2_64
87.9
M2_65
87.9
M2_66
87.6
M2_67
87.0
M2_68
86.1
M2_69
85.5
M2_70
85.5
M2_71
84.5
M2_72
84.1
M2_73
83.3
M2_74
83.0
M2_75
83.0
M2_76
82.8
M2_77
82.8
M2_78
82.2
M2_79
82.1
M2_80
80.7
M2_81
77.2
M2_82
77.0
M2_83
76.8
M2_84
76.2
M2_85
75.3
M2_86
74.5
M2_87
74.3
M2_88
72.7
M2_89
70.1
M2_90
68.7
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Human Protein Atlas project is funded
