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  • SUMMARY

  • TISSUE

  • BRAIN

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  • CORO2B
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

144.409
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:37.6 nTPM
HPA Brain:72.3 nTPM
GTEx:37.6 nTPM
Pig:54.9 nTPM
Mouse:48.5 nTPM
Allen mouse:3.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody HPA017960
Hypothalamus mean intensity 144.409
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus 60.565
Mammillary nucleus -
Periventricular hypothalamic nucleus 120.050
Supraoptic nucleus 144.409
Tuberal nucleus 71.878
Ventral tuberomammillary nucleus -
Lateral preoptic area 42.841
Medial preoptic area 65.159
Suprachiasmatic nucleus -
Paraventricular hypothalamic nucleus 49.535
Anterior hypothalamic area, central 65.377
Ventral medial hypothalamic nucleus 74.378
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 93.302
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 40.851
Dorsal medial hypothalamic nucleus 75.685
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

72.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 50.9
2226 Male, age 75, left hemisphere 53.4
1961 Female, age 42, unknown 48.5
Dorsomedial nucleus
nTPM: 69.0
1989 Male, age 62, unknown 88.9
2017 Female, age 42, unknown 64.1
2041 Female, age 72, unknown 53.9
Lateral hypothalamic area
nTPM: 66.1
2271 Male, age 75, both hemispheres 82.3
2228 Male, age 66, unknown 69.9
1791 Male, age 80, right hemisphere 64.0
2412 Male, age 62, unknown 48.3
Mammillary body
nTPM: 72.3
1834 Female, age 42, unknown 79.3
1945 Male, age 80, right hemisphere 75.9
1948 Female, age 72, unknown 75.8
1923 Female, age 72, unknown 67.0
2413 Male, age 66, unknown 63.4
Paraventricular nucleus
nTPM: 59.2
2700 Male, age 62, unknown 59.2
Preoptic area
nTPM: 59.2
2414 Female, age 72, unknown 74.1
1861 Female, age 42, unknown 61.8
1907 Male, age 80, right hemisphere 41.6
Supraoptic nucleus
nTPM: 61.0
2835 Female, age 72, unknown 68.2
2043 Male, age 62, unknown 67.7
1894 Female, age 72, unknown 47.1
Ventromedial nucleus
nTPM: 54.8
1982 Female, age 72, unknown 56.1
1822 Female, age 42, unknown 53.6

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

37.6
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 37.6
Samples: 257

Max nTPM: 101.2
Min nTPM: 17.6
Std nTPM: 11.4
Median nTPM: 34.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 101.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 91.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 86.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 70.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 70.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 67.7
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 65.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 60.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 60.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 57.6
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 57.5
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 57.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 57.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 56.9
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 56.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 56.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 55.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 55.3
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 55.2
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 54.6
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 54.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 54.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 53.4
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 52.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 52.4
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 52.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 51.1
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 51.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 51.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 51.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 50.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 50.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 50.2
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 50.0
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 49.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 49.6
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 48.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 48.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 48.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 47.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 47.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 47.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 47.3
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 47.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 47.3
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 47.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 47.2
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 46.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 46.8
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 46.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 46.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 46.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 45.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 45.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 45.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 45.1
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 45.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 45.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 44.7
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 44.1
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 43.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 43.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 43.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 43.5
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 43.1
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 43.1
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 42.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 42.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 42.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 42.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 42.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 42.1
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 41.7
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 41.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 41.6
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 41.2
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 41.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 41.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 40.4
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 40.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 40.2
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 40.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 39.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 39.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 39.4
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 39.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 39.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 38.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 38.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 38.7
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 38.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 38.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 38.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 38.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 38.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 38.1
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 38.1
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 38.0
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 37.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 37.7
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 37.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 37.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 37.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 37.4
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 36.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 36.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 36.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 36.7
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 36.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 36.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 36.2
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 36.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 35.9
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 35.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 35.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 35.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 35.6
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 35.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 35.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 35.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 35.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 35.3
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 35.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 35.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 34.9
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 34.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 34.8
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 34.5
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 34.5
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 34.4
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 34.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 34.3
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 34.3
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 34.3
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 34.1
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 34.1
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 33.9
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 33.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 33.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 33.6
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 33.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 33.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 33.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 33.2
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 33.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 33.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 33.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 33.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 32.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 32.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 32.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 32.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 32.7
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 32.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 32.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 32.6
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 32.5
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 32.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 32.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 32.2
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 32.1
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 32.1
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 32.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 31.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 31.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 31.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 31.7
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 31.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 31.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 31.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 31.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 31.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 31.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 31.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 31.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 31.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 31.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 31.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 31.0
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 31.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 31.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 30.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 30.9
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 30.8
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 30.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 30.7
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 30.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 30.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 30.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 30.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 30.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 30.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 30.3
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 30.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 30.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 30.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 30.0
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 30.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 30.0
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 29.9
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 29.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 29.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 29.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 29.6
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 29.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 29.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 29.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 29.1
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 28.9
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 28.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 28.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 28.4
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 28.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 28.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 28.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 27.9
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 27.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 27.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 27.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 27.7
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 27.7
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 27.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 27.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 27.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 27.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 27.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 27.3
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 27.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 26.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 26.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 26.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 26.2
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 26.1
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 26.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 25.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 25.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 25.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 25.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 25.5
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 25.1
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 24.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 24.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 24.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 24.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 24.6
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 24.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 24.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 24.2
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 23.8
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 23.7
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 23.5
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 23.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 23.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 22.4
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 21.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 21.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 17.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

54.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 54.9
Samples: 4

Max nTPM: 66.1
Min nTPM: 35.3
Sample A Female 58.4
Sample B Female 66.1
Sample C Male 59.8
Sample D Male 35.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

48.5
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 48.5
Samples: 4

Max nTPM: 49.9
Min nTPM: 47.3
Sample A Male 49.4
Sample B Male 47.3
Sample C Female 47.5
Sample D Female 49.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.6
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 3.6
68845275 Antisense, RP_050224_01_E01, Mouse strain C57BL/6J (56 days, male) 5.0
72077454 Antisense, RP_051017_03_A08, Mouse strain C57BL/6J (56 days, male) 2.1

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