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  • SUMMARY

  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:49.8 nTPM
HPA Brain:35.6 nTPM
GTEx:49.8 nTPM
Pig:39.1 nTPM
Mouse:29.1 nTPM
Allen mouse:0.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

35.6
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 32.7
2226 Male, age 75, left hemisphere 40.2
1961 Female, age 42, unknown 25.3
Dorsomedial nucleus
nTPM: 22.5
1989 Male, age 62, unknown 25.0
2041 Female, age 72, unknown 22.4
2017 Female, age 42, unknown 20.0
Lateral hypothalamic area
nTPM: 35.6
2228 Male, age 66, unknown 56.4
1791 Male, age 80, right hemisphere 37.4
2271 Male, age 75, both hemispheres 24.4
2412 Male, age 62, unknown 24.3
Mammillary body
nTPM: 23.7
1923 Female, age 72, unknown 39.3
2413 Male, age 66, unknown 22.6
1945 Male, age 80, right hemisphere 21.4
1948 Female, age 72, unknown 20.8
1834 Female, age 42, unknown 14.5
Paraventricular nucleus
nTPM: 23.1
2700 Male, age 62, unknown 23.1
Preoptic area
nTPM: 25.7
1907 Male, age 80, right hemisphere 38.0
2414 Female, age 72, unknown 20.0
1861 Female, age 42, unknown 19.1
Supraoptic nucleus
nTPM: 18.6
1894 Female, age 72, unknown 20.1
2835 Female, age 72, unknown 19.4
2043 Male, age 62, unknown 16.3
Ventromedial nucleus
nTPM: 25.6
1982 Female, age 72, unknown 31.4
1822 Female, age 42, unknown 19.7

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

49.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 49.8
Samples: 257

Max nTPM: 120.9
Min nTPM: 11.6
Std nTPM: 17.4
Median nTPM: 49.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 120.9
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 99.6
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 98.7
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 89.1
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 88.5
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 85.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 83.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 77.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 76.5
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 76.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 75.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 75.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 75.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 74.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 74.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 74.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 74.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 73.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 73.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 73.1
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 72.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 71.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 71.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 71.7
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 71.6
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 71.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 71.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 71.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 71.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 71.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 70.7
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 69.9
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 69.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 69.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 69.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 68.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 68.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 67.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 67.4
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 67.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 67.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 66.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 66.7
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 66.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 66.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 65.9
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 65.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 65.8
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 65.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 65.7
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 65.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 65.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 65.0
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 64.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 64.7
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 64.7
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 64.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 64.6
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 64.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 64.3
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 63.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 63.5
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 63.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 63.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 62.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 62.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 62.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 62.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 62.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 62.0
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 61.9
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 61.8
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 61.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 61.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 61.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 60.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 60.6
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 60.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 60.5
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 59.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 59.8
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 59.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 59.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 58.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 58.7
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 58.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 58.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 58.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 58.3
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 58.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 57.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 57.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 57.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 57.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 56.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 56.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 56.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 55.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 55.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 55.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 55.2
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 54.7
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 54.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 54.4
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 53.8
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 53.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 53.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 53.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 53.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 53.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 53.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 52.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 52.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 52.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 52.1
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 52.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 51.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 51.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 51.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 51.1
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 51.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 51.0
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 50.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 50.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 50.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 50.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 50.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 50.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 49.7
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 49.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 48.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 48.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 48.5
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 48.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 47.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 47.9
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 47.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 47.3
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 47.1
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 46.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 46.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 46.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 46.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 46.3
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 46.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 46.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 46.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 45.9
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 45.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 45.7
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 45.1
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 44.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 44.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 44.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 44.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 44.1
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 44.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 44.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 43.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 43.4
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 43.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 43.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 42.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 42.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 42.7
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 42.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 42.5
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 42.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 42.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 41.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 41.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 40.9
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 40.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 40.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 40.1
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 40.0
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 40.0
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 39.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 39.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 39.5
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 39.4
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 39.3
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 38.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 38.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 38.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 38.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 38.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 38.1
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 38.0
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 38.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 37.8
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 37.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 37.1
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 37.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 36.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 36.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 36.8
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 36.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 36.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 36.1
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 36.1
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 35.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 34.9
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 34.5
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 34.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 34.1
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 34.0
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 33.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 33.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 33.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 33.5
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 33.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 33.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 33.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 32.7
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 32.5
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 31.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 31.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 31.4
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 31.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 31.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 30.5
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 30.4
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 30.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 30.1
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 29.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 29.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 28.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 28.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 28.0
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 27.9
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 26.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 26.1
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 26.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 25.0
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 24.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 24.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 24.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 24.0
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 23.8
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 23.3
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 23.0
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 22.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 21.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 21.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 20.7
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 20.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 20.5
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 18.9
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 18.5
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 17.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 16.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 15.3
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 15.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 14.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 13.8
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 11.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

39.1
Pig sample Sample description nTPM
Hypothalamus
nTPM: 39.1
Samples: 4

Max nTPM: 52.0
Min nTPM: 33.7
Sample A Female 52.0
Sample B Female 36.2
Sample C Male 33.7
Sample D Male 34.5

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

29.1
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 29.0
Samples: 4

Max nTPM: 31.4
Min nTPM: 25.4
Sample A Male 30.9
Sample B Male 31.4
Sample C Female 28.4
Sample D Female 25.4

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.8
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.8
73617678 Antisense, RP_051130_02_D08, Mouse strain C57BL/6J (56 days, male) 0.8

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